RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 COL27A1Q8IZC6 1860 aaPredicted RBP20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 LOC100289279A0A1B0GTE1 492 aa20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 ZNHIT1O43257 154 aa20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 SYT7O43581 403 aa20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 SP9P0CG40 484 aa20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 PSMB1P20618 241 aaKnown RBP20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 NTF4P34130 210 aa20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 BAIAP2L2Q6UXY1 529 aa20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 GLRX5Q86SX6 157 aa20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 GTPBP8Q8N3Z3 284 aaPredicted RBP20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 OR4C16Q8NGL9 310 aa20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 OXGR1Q96P68 337 aa20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 ZNF416Q9BWM5 594 aa20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 ANGPTL4Q9BY76 406 aa20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 DEPPQ9NTK1 212 aa20.46■□□□□ 0.87
CLPTM1-201ENST00000337392 ACOT7O00154 380 aa20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 HSD11B1P28845 292 aa20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 ABHD12BQ7Z5M8 362 aaPredicted RBP20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 NOX3Q9HBY0 568 aa20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 DCHS1Q96JQ0 3298 aa20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 PINLYPA6NC86 204 aa20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 M0R296 226 aa20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 ERVH48-1M5A8F1 160 aa20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 MTRF1O75570 445 aaKnown RBP20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 C1QBP02746 253 aa20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 CD3DP04234 171 aa20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 TIGD3Q6B0B8 471 aa20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 M1APQ8TC57 530 aa20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 CMTM3Q96MX0 182 aa20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 PLEKHA1Q9HB21 404 aa20.45■□□□□ 0.86
CLPTM1-201ENST00000337392 WIPF3A6NGB9 483 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 ZNF121P58317 390 aaPredicted RBP20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 SLC22A6Q4U2R8 563 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 SPINK14Q6IE38 97 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 SLC25A47Q6Q0C1 308 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 KLHL24Q6TFL4 600 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 HSPB2A8KAH6 182 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 SMAD9O15198 467 aaKnown RBP20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 CSN2P05814 226 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 ACP1P24666 158 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 OC90Q02509 493 aaPredicted RBP20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 TAF13Q15543 124 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 HSPB2Q16082 182 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 HACD4Q5VWC8 232 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 OR8B12Q8NGG6 310 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 OR6N1Q8NGY5 312 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 ZFP64Q9NPA5 681 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 FANCFQ9NPI8 374 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 KCNN3Q9UGI6 736 aa20.44■□□□□ 0.86
CLPTM1-201ENST00000337392 OR5H15A6NDH6 313 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 TMEM235A6NFC5 223 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 C9orf172C9J069 976 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 DBHP09172 617 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 MMP16P51512 607 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 GABREP78334 506 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 GLT8D1Q68CQ7 371 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 FAM57BQ71RH2 274 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 SLC51BQ86UW2 128 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 OR2AJ1Q8NGZ0 328 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 OR6X1Q8NH79 312 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 NPRL2Q8WTW4 380 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 RBM24Q9BX46 236 aaKnown RBP20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 HES7Q9BYE0 225 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 SH2D2AQ9NP31 389 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 PNRC2Q9NPJ4 139 aaKnown RBP20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 CA10Q9NS85 328 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 ZNF275Q9NSD4 429 aaPredicted RBP20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 NPIPB13A6NJU9 1138 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 NPIPB4C9JG80 1138 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 PYCARD-AS1I3L0S3 204 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 M0QYG6 137 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 PEX14O75381 377 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 TRAPPC6AO75865 159 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 HRGP04196 525 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 GTF2F2P13984 249 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 EIF1P41567 113 aaKnown RBP20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 H3F3AP84243 136 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 ROBO4Q8WZ75 1007 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 ZBTB8AQ96BR9 441 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 HDGFL3Q9Y3E1 203 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 NBEAQ8NFP9 2946 aa20.43■□□□□ 0.86
CLPTM1-201ENST00000337392 F5H5K5 113 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 RBBP9O75884 186 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 JMJD7P0C870 316 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 PATE4P0C8F1 98 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 ACHEP22303 614 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 ANGPT1Q15389 498 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 CSRP2Q16527 193 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 WIPI1Q5MNZ9 446 aaPredicted RBP20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 BEST3Q8N1M1 668 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 OR4S1Q8NGB4 309 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 OR51S1Q8NGJ8 323 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 DEDD2Q8WXF8 326 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 LIN37Q96GY3 246 aaPredicted RBP20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 GPR84Q9NQS5 396 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 A0A1B0GTI1 187 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 A0A1W2PP11 408 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 SSTR2P30874 369 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 P4HTMQ9NXG6 502 aa20.42■□□□□ 0.86
CLPTM1-201ENST00000337392 CD63P08962 238 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms