RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 TMEM239Q8WW34 195 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 FAM3CQ92520 227 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 PIGBQ92521 554 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 MOAP1Q96BY2 351 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 TAAR6Q96RI8 345 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 ORAI2Q96SN7 254 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 ALG12Q9BV10 488 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 SLC12A9Q9BXP2 914 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 MTFP1Q9UDX5 166 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 SRPK3Q9UPE1 567 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 TBL2Q9Y4P3 447 aaKnown RBP7.77□□□□□ -1.17
TDP1-201ENST00000335725 TRIP11Q15643 1979 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 FTCDNL1E5RQL4 147 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 CLDN34H7C241 214 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 SLC16A5O15375 505 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 EFEMP2O95967 443 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 OPN1SWP03999 348 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 LBX1P52954 281 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 SSBP1Q04837 148 aaKnown RBP7.77□□□□□ -1.17
TDP1-201ENST00000335725 DUSP5Q16690 384 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 CD300LDQ6UXZ3 194 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 IQCF1Q8N6M8 205 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 COX18Q8N8Q8 333 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 ARL14EPQ8N8R7 260 aaPredicted RBP7.77□□□□□ -1.17
TDP1-201ENST00000335725 OR10H4Q8NGA5 316 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 OR4X1Q8NH49 305 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 ZCCHC14Q8WYQ9 949 aaKnown RBP7.77□□□□□ -1.17
TDP1-201ENST00000335725 GPR146Q96CH1 333 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 RSPRY1Q96DX4 576 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 LOXL4Q96JB6 756 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 OR2V2Q96R30 315 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 SRD5A3Q9H8P0 318 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 COL2A1P02458 1487 aaPredicted RBP7.77□□□□□ -1.17
TDP1-201ENST00000335725 HBP1O60381 514 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 TBX19O60806 448 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 CNMDO75829 334 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 PET100P0DJ07 73 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 PTGER3P43115 390 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 CRYBA2P53672 197 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 CSNK1G2P78368 415 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 PRDX4Q13162 271 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 PCBP2Q15366 365 aaKnown RBP eCLIP7.77□□□□□ -1.177e-11■■■■■ 50.5
TDP1-201ENST00000335725 MMDQ15546 238 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 PRSS8Q16651 343 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 PLEKHS1Q5SXH7 462 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 NIPAL3Q6P499 406 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 CPOQ8IVL8 374 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 D2HGDHQ8N465 521 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 MS4A10Q96PG2 267 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 NIPSNAP3BQ9BS92 247 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 MARCH2Q9P0N8 246 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 CLN8Q9UBY8 286 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 UQCR10Q9UDW1 63 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 CLEC4EQ9ULY5 219 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 LRP12Q9Y561 859 aa7.77□□□□□ -1.17
TDP1-201ENST00000335725 TMEM229AB2RXF0 380 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 JTBO76095 146 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 SLC16A8O95907 504 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 H1F0P07305 194 aaKnown RBP7.76□□□□□ -1.17
TDP1-201ENST00000335725 ST6GAL1P15907 406 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 CX3CR1P49238 355 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 TTLL4Q14679 1199 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 TCTN1Q2MV58 587 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 ACOT6Q3I5F7 207 aaPredicted RBP7.76□□□□□ -1.17
TDP1-201ENST00000335725 TMEM225Q6GV28 225 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 OR4K14Q8NGD5 310 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 SMPDL3BQ92485 455 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 SLC46A2Q9BY10 475 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 TRAV26-1A0A087WT03 109 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 CSN2P05814 226 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 EDNRBP24530 442 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 BLKP51451 505 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 HMGCS1Q01581 520 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 DHRS2Q13268 280 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 ENDOGQ14249 297 aaKnown RBP7.76□□□□□ -1.17
TDP1-201ENST00000335725 FAM180AQ6UWF9 173 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 TOMM20LQ6UXN7 152 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 TEX43Q6ZNM6 134 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 ZNF101Q8IZC7 436 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 AQP10Q96PS8 301 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 NMES1Q9C002 83 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 PORCNQ9H237 461 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 FAM124BQ9H5Z6 455 aaPredicted RBP7.76□□□□□ -1.17
TDP1-201ENST00000335725 ELL3Q9HB65 397 aaPredicted RBP7.76□□□□□ -1.17
TDP1-201ENST00000335725 MRPL22Q9NWU5 206 aaKnown RBP7.76□□□□□ -1.17
TDP1-201ENST00000335725 CDC42EP3Q9UKI2 254 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 STRAPQ9Y3F4 350 aaKnown RBP7.76□□□□□ -1.17
TDP1-201ENST00000335725 ENTPD2Q9Y5L3 495 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 TRBV4-1A0A0J9YWV2 114 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 TRBC2A0A5B9 178 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 NPEPPSL1A6NEC2 478 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 ZNF716A6NP11 495 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 PRICKLE3O43900 615 aaPredicted RBP7.76□□□□□ -1.17
TDP1-201ENST00000335725 RAMP1O60894 148 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 HLA-AP01891 365 aaKnown RBP7.76□□□□□ -1.17
TDP1-201ENST00000335725 ZNF735P0CB33 412 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 ZNF286BP0CG31 522 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 CEACAM1P13688 526 aa7.76□□□□□ -1.17
TDP1-201ENST00000335725 HNRNPA3P51991 378 aaKnown RBP7.76□□□□□ -1.17
TDP1-201ENST00000335725 RND2P52198 227 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms