RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 TBX19O60806 448 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 LYPD3O95274 346 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 IFNA17P01571 189 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 EIF1AXP47813 144 aaKnown RBP11.53□□□□□ -0.56
HERC6-202ENST00000273960 DNASE1L1P49184 302 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 SHHQ15465 462 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 FAM180AQ6UWF9 173 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 DRAM2Q6UX65 266 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 IL34Q6ZMJ4 242 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 NKX2-4Q9H2Z4 354 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 MRPL22Q9NWU5 206 aaKnown RBP11.53□□□□□ -0.56
HERC6-202ENST00000273960 B9D1Q9UPM9 204 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 COL4A3Q01955 1670 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 IFITM10A6NMD0 228 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 HEXAP06865 529 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 HNRNPA1P09651 372 aaKnown RBP eCLIP11.53□□□□□ -0.56
HERC6-202ENST00000273960 ZNF735P0CB33 412 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 IGFBP4P22692 258 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 PLAURQ03405 335 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 ARHGAP11BQ3KRB8 267 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 KDM8Q8N371 416 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 SLC30A7Q8NEW0 376 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 OR10G6Q8NH81 332 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 OR10C1Q96KK4 312 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 RSPH9Q9H1X1 276 aaPredicted RBP11.53□□□□□ -0.56
HERC6-202ENST00000273960 DHDHQ9UQ10 334 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 RFNGQ9Y644 331 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 CABIN1Q9Y6J0 2220 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 A0A0A6YYH2 397 aa11.52□□□□□ -0.56
HERC6-202ENST00000273960 A6NJ64 397 aa11.52□□□□□ -0.56
HERC6-202ENST00000273960 ZNF705GA8MUZ8 300 aaPredicted RBP11.52□□□□□ -0.56
HERC6-202ENST00000273960 ZNF205O95201 554 aa11.52□□□□□ -0.56
HERC6-202ENST00000273960 OR6A2O95222 327 aa11.52□□□□□ -0.56
HERC6-202ENST00000273960 P2RY2P41231 377 aa11.52□□□□□ -0.56
HERC6-202ENST00000273960 RUNX3Q13761 415 aa11.52□□□□□ -0.56
HERC6-202ENST00000273960 C10orf91Q5T1B1 145 aa11.52□□□□□ -0.56
HERC6-202ENST00000273960 HSD17B11Q8NBQ5 300 aa11.52□□□□□ -0.56
HERC6-202ENST00000273960 RNASE11Q8TAA1 199 aaKnown RBP11.52□□□□□ -0.56
HERC6-202ENST00000273960 TEX13DA0A0J9YY54 714 aaPredicted RBP11.52□□□□□ -0.57
HERC6-202ENST00000273960 PPIHO43447 177 aaKnown RBP11.52□□□□□ -0.57
HERC6-202ENST00000273960 CYTIPO60759 359 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 GLCEO94923 617 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 IGHV2-5P01817 119 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 CT62P0C5K7 136 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 KIR3DL2P43630 455 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 RGS19P49795 217 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 ITPRIPL2Q3MIP1 535 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 COX15Q7KZN9 410 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 RNF166Q96A37 237 aaPredicted RBP11.52□□□□□ -0.57
HERC6-202ENST00000273960 MOGAT1Q96PD6 335 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 DPEP2Q9H4A9 486 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 SERGEFQ9UGK8 458 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 ICAM5Q9UMF0 924 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 PNPP00491 289 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 SERPINA2P20848 420 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 MLF2Q15773 248 aaPredicted RBP11.52□□□□□ -0.57
HERC6-202ENST00000273960 ZNF542PQ5EBM4 170 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 PNLDC1Q8NA58 520 aaKnown RBP11.52□□□□□ -0.57
HERC6-202ENST00000273960 ASB17Q8WXJ9 295 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 ASB16Q96NS5 453 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 RBM14Q96PK6 669 aaKnown RBP11.52□□□□□ -0.57
HERC6-202ENST00000273960 C1orf198Q9H425 327 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 KCNJ16Q9NPI9 418 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 PLA2G2EQ9NZK7 142 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 ENTPD2Q9Y5L3 495 aa11.52□□□□□ -0.57
HERC6-202ENST00000273960 A0A0B4J2E0 115 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 A0A1B0GX12 115 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 SLC31A2O15432 143 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 APODP05090 189 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 CAMLGP49069 296 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 CLDN6P56747 220 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 FHL1Q13642 323 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 TMEM244Q5VVB8 128 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 MBNL1Q9NR56 388 aaKnown RBP11.51□□□□□ -0.57
HERC6-202ENST00000273960 ANAPC1Q9H1A4 1944 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 EFSO43281 561 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 RAMP1O60894 148 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 DDTP30046 118 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 RBP2P50120 134 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 GUK1Q16774 197 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 LINC01590Q5TEZ4 76 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 NSUN5P2Q63ZY6 315 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 P4HA3Q7Z4N8 544 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 SLC25A42Q86VD7 318 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 TMEM229BQ8NBD8 167 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 OR52E1Q8NGJ3 308 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 WFIKKN2Q8TEU8 576 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 MR1Q95460 341 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 ALX4Q9H161 411 aaPredicted RBP11.51□□□□□ -0.57
HERC6-202ENST00000273960 CKLFQ9UBR5 152 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 WIF1Q9Y5W5 379 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 PRAMEF26H0Y7S4 382 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 DVL1P1P54792 670 aaPredicted RBP11.51□□□□□ -0.57
HERC6-202ENST00000273960 RUNX2Q13950 521 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 PARM1Q6UWI2 310 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 RAB42Q8N4Z0 105 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 MRGPRFQ96AM1 343 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 RNF122Q9H9V4 155 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 CENPMQ9NSP4 180 aa11.51□□□□□ -0.57
HERC6-202ENST00000273960 PARPBPQ9NWS1 579 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms