RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 TIMP2P16035 220 aa12.02□□□□□ -0.49
PCDHGA3-201ENST00000253812 AMTP48728 403 aa12.02□□□□□ -0.49
PCDHGA3-201ENST00000253812 Q1RN00 199 aa12.02□□□□□ -0.49
PCDHGA3-201ENST00000253812 OR5M9Q8NGP3 310 aa12.02□□□□□ -0.49
PCDHGA3-201ENST00000253812 PRRX2Q99811 253 aa12.02□□□□□ -0.49
PCDHGA3-201ENST00000253812 RHNO1Q9BSD3 238 aa12.02□□□□□ -0.49
PCDHGA3-201ENST00000253812 ZNF426Q9BUY5 554 aa12.02□□□□□ -0.49
PCDHGA3-201ENST00000253812 HCFC1R1Q9NWW0 138 aa12.02□□□□□ -0.49
PCDHGA3-201ENST00000253812 PITPNC1Q9UKF7 332 aa12.02□□□□□ -0.49
PCDHGA3-201ENST00000253812 ENTPD2Q9Y5L3 495 aa12.02□□□□□ -0.49
PCDHGA3-201ENST00000253812 SCN7AQ01118 1682 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 C17orf105B2RV13 164 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 KIAA0895LQ68EN5 471 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 IFI44Q8TCB0 444 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 KLHDC7BQ96G42 594 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 ULBP2Q9BZM5 246 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 NAT8BQ9UHF3 227 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 OR5H15A6NDH6 313 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 OR5H1A6NKK0 313 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 FZD6O60353 706 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 SELENOFO60613 162 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 GLI4P10075 376 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 SLC25A4P12235 298 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 EXOSC7Q15024 291 aaKnown RBP12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 ETFBKMTQ8IXQ9 262 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 IL22RA1Q8N6P7 574 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 LINC00469Q8N7U9 141 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 ZNF738Q8NE65 137 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 CSNK1G1Q9HCP0 422 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 KLF15Q9UIH9 416 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 MYO5AQ9Y4I1 1855 aaKnown RBP12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 TUBGCP6Q96RT7 1819 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 A0A1W2PP55 124 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 DBX1A6NMT0 343 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 ZNF264O43296 627 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 HLA-DRB3P79483 266 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 PRSS36Q5K4E3 855 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 TMEM268Q5VZI3 342 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 TMEM229BQ8NBD8 167 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 MCHR2Q969V1 340 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 CHST11Q9NPF2 352 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 NRAPQ86VF7 1730 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 C7orf77A4D0Y5 90 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 PI3P19957 117 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 HRH1P35367 487 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 FOXO1Q12778 655 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 PKDCCQ504Y2 493 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 SLC16A14Q7RTX9 510 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 OR51H1Q8NH63 302 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 DTD2Q96FN9 168 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 PDXPQ96GD0 296 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 SLC25A19Q9HC21 320 aa12.01□□□□□ -0.49
PCDHGA3-201ENST00000253812 SCN9AQ15858 1988 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 A0A0U1RQS6 177 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 ARG1P05089 322 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 CD79AP11912 226 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 AVPR2P30518 371 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 ZP2Q05996 745 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 ARRDC1Q8N5I2 433 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 SLC38A9Q8NBW4 561 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 ISOC2Q96AB3 205 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 SSUH2Q9Y2M2 353 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 LAMA4Q16363 1823 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 SIPA1L3O60292 1781 aaPredicted RBP12□□□□□ -0.49
PCDHGA3-201ENST00000253812 A0A0B4J203 849 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 PLRG1O43660 514 aaKnown RBP12□□□□□ -0.49
PCDHGA3-201ENST00000253812 SUSD5O60279 629 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 LDB3O75112 727 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 P04436 131 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 OTX2P32243 289 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 CD200P41217 278 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 EOGTQ5NDL2 527 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 STUMQ69YW2 141 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 FA2HQ7L5A8 372 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 FIBINQ8TAL6 211 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 NUDCD2Q8WVJ2 157 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 MS4A7Q9GZW8 240 aaPredicted RBP12□□□□□ -0.49
PCDHGA3-201ENST00000253812 TPRP12270 2363 aaKnown RBP12□□□□□ -0.49
PCDHGA3-201ENST00000253812 ZNF891A8MT65 544 aaPredicted RBP12□□□□□ -0.49
PCDHGA3-201ENST00000253812 KIAA1324LA8MWY0 1029 aaPredicted RBP12□□□□□ -0.49
PCDHGA3-201ENST00000253812 CDRT15L2A8MXV6 281 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 SIAH2O43255 324 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 XRCC2O43543 280 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 GSK3AP49840 483 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 AFMIDQ63HM1 303 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 ZNF626Q68DY1 528 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 TMEM179BQ7Z7N9 219 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 PGBD5Q8N414 524 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 MFSD9Q8NBP5 474 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 KLHDC9Q8NEP7 349 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 RAB24Q969Q5 203 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 OR10C1Q96KK4 312 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 BANF2Q9H503 90 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 USP3Q9Y6I4 520 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 PRSS21Q9Y6M0 314 aa12□□□□□ -0.49
PCDHGA3-201ENST00000253812 A0A1B0GTQ1 180 aa11.99□□□□□ -0.49
PCDHGA3-201ENST00000253812 LNP1A1A4G5 178 aa11.99□□□□□ -0.49
PCDHGA3-201ENST00000253812 SDCBPO00560 298 aaPredicted RBP11.99□□□□□ -0.49
PCDHGA3-201ENST00000253812 EPHA2P29317 976 aa11.99□□□□□ -0.49
PCDHGA3-201ENST00000253812 GCH1P30793 250 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms