RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
UPK1A-201ENST00000222275 POM121L2Q96KW2 1035 aa11.78□□□□□ -0.52
UPK1A-201ENST00000222275 BCL2L14Q9BZR8 327 aa11.78□□□□□ -0.52
UPK1A-201ENST00000222275 NIPAL2Q9H841 368 aa11.78□□□□□ -0.52
UPK1A-201ENST00000222275 SP140LQ9H930 580 aa11.78□□□□□ -0.52
UPK1A-201ENST00000222275 DDX28Q9NUL7 540 aaKnown RBP11.78□□□□□ -0.52
UPK1A-201ENST00000222275 RAB26Q9ULW5 256 aa11.78□□□□□ -0.52
UPK1A-201ENST00000222275 ATP23Q9Y6H3 246 aa11.78□□□□□ -0.52
UPK1A-201ENST00000222275 CUBNO60494 3623 aa11.78□□□□□ -0.52
UPK1A-201ENST00000222275 FBN1P35555 2871 aaKnown RBP11.77□□□□□ -0.52
UPK1A-201ENST00000222275 C5orf49A4QMS7 147 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 E7EQL1 145 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 ZNF670-ZNF695F2Z2N8 137 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 ATP6V1G2-DDX39BF2Z307 99 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 ICMTO60725 284 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 CELA3BP08861 270 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 CCNOP22674 350 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 NR4A1P22736 598 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 NAA10P41227 235 aaPredicted RBP11.77□□□□□ -0.53
UPK1A-201ENST00000222275 TPTEP56180 551 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 RAB40BQ12829 278 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 ZNF544Q6NX49 715 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 LYPD4Q6UWN0 246 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 B3GLCTQ6Y288 498 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 USP51Q70EK9 711 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 BCDIN3DQ7Z5W3 292 aaKnown RBP11.77□□□□□ -0.53
UPK1A-201ENST00000222275 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.77□□□□□ -0.53
UPK1A-201ENST00000222275 OR51G2Q8NGK0 314 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 ST7LQ8TDW4 575 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 SMAP2Q8WU79 429 aaPredicted RBP11.77□□□□□ -0.53
UPK1A-201ENST00000222275 THEM6Q8WUY1 208 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 FBXW5Q969U6 566 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 MRPL48Q96GC5 212 aaKnown RBP11.77□□□□□ -0.53
UPK1A-201ENST00000222275 COX4I2Q96KJ9 171 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 COPS4Q9BT78 406 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 ABHD6Q9BV23 337 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 MROQ9BYG7 248 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 ADGRL4Q9HBW9 690 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 TBCCD1Q9NVR7 557 aa11.77□□□□□ -0.53
UPK1A-201ENST00000222275 FBXO9Q9UK97 447 aaPredicted RBP11.77□□□□□ -0.53
UPK1A-201ENST00000222275 RTTNQ86VV8 2226 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 SMAD7O15105 426 aaKnown RBP11.76□□□□□ -0.53
UPK1A-201ENST00000222275 SELENOFO60613 162 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 ZNF254O75437 659 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 FADS2O95864 444 aaKnown RBP11.76□□□□□ -0.53
UPK1A-201ENST00000222275 ABHD16AO95870 558 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 ALOX5APP20292 161 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 HSD11B1P28845 292 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 GLRXP35754 106 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 CDKN1AP38936 164 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 SELENOVP59797 346 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 EGR3Q06889 387 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 C6orf52Q5T4I8 152 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 TMEM154Q6P9G4 183 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 CFAP77Q6ZQR2 320 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 EGFL6Q8IUX8 553 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 SLC35F2Q8IXU6 374 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 OR5L1Q8NGL2 311 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 RNF133Q8WVZ7 376 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 RNFT2Q96EX2 444 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 MAP6Q96JE9 813 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 C4orf45Q96LM5 186 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 ZNF184Q99676 751 aaPredicted RBP11.76□□□□□ -0.53
UPK1A-201ENST00000222275 DHRS9Q9BPW9 319 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 ANKRD60Q9BZ19 345 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 ZNF442Q9H7R0 627 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 CENPMQ9NSP4 180 aa11.76□□□□□ -0.53
UPK1A-201ENST00000222275 CISD1Q9NZ45 108 aaKnown RBP11.76□□□□□ -0.53
UPK1A-201ENST00000222275 COL6A5A8TX70 2615 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 LOC100509620A0A075B734 347 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 H3BSA7 217 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 CLIC3O95833 236 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 MRPL3P09001 348 aaKnown RBP11.75□□□□□ -0.53
UPK1A-201ENST00000222275 H2BFMP0C1H6 154 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 DBTP11182 482 aaKnown RBP11.75□□□□□ -0.53
UPK1A-201ENST00000222275 BMP4P12644 408 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 CALCRP30988 508 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 APOBEC3AP31941 199 aaPredicted RBP11.75□□□□□ -0.53
UPK1A-201ENST00000222275 RPS27P42677 84 aaKnown RBP11.75□□□□□ -0.53
UPK1A-201ENST00000222275 UCP2P55851 309 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 ATP5J2P56134 94 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 CXCR4P61073 352 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 ZNF91Q05481 1191 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 KRTAP1-1Q07627 177 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 DBPQ10586 325 aaPredicted RBP11.75□□□□□ -0.53
UPK1A-201ENST00000222275 CDK5R2Q13319 367 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 SNTB2Q13425 540 aaKnown RBP11.75□□□□□ -0.53
UPK1A-201ENST00000222275 TNK1Q13470 666 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 MED21Q13503 144 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 OTPQ5XKR4 325 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 DRAM2Q6UX65 266 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 KRT77Q7Z794 578 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 BIVMQ86UB2 503 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 MYPOPQ86VE0 399 aaPredicted RBP11.75□□□□□ -0.53
UPK1A-201ENST00000222275 MAPK1IP1LQ8NDC0 245 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 TMEM171Q8WVE6 324 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 APOBEC3DQ96AK3 386 aaPredicted RBP11.75□□□□□ -0.53
UPK1A-201ENST00000222275 KCNJ15Q99712 375 aa11.75□□□□□ -0.53
UPK1A-201ENST00000222275 PNRC2Q9NPJ4 139 aaKnown RBP11.75□□□□□ -0.53
UPK1A-201ENST00000222275 INPP5EQ9NRR6 644 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms