RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 RNF115Q9Y4L5 304 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 ADGRG4Q8IZF6 3080 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 SLC1A7O00341 560 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 CTAG2O75638 210 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 CRYAAP02489 173 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 OPRL1P41146 370 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 WNT5AP41221 380 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 RAB40BQ12829 278 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 LRRN1Q6UXK5 716 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 ZNF704Q6ZNC4 412 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 IL17RDQ8NFM7 739 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 OR1J2Q8NGS2 313 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 LILRB1Q8NHL6 650 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 RADILQ96JH8 1075 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 OR8B4Q96RC9 309 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 COPS4Q9BT78 406 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 FGF20Q9NP95 211 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 PSORS1C1Q9UIG5 152 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 TMEM14AQ9Y6G1 99 aa17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 HEATR1Q9H583 2144 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-222ENST00000600320 NAV2Q8IVL1 2488 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 IGHA1P01876 353 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 ANOS1P23352 680 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 MVKQ03426 396 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 KRT80Q6KB66 452 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 SLC22A25Q6T423 547 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 ZNF322Q6U7Q0 402 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 NAA40Q86UY6 237 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 SGCDQ92629 289 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 MARVELD3Q96A59 401 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 KCNJ15Q99712 375 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 KCNS3Q9BQ31 491 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 ZNF649Q9BS31 505 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 OR51B6Q9H340 312 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 FKBP14Q9NWM8 211 aa17.29■□□□□ 0.36
SHKBP1-222ENST00000600320 F5H5K5 113 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 PHYHO14832 338 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 GOSR1O95249 250 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 H2BFMP0C1H6 154 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 ACSM4P0C7M7 580 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 FAM157BP0CG42 384 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 OTX1P32242 354 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 PRKXP51817 358 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 ACTC1P68032 377 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 ACTA1P68133 377 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 GALK2Q01415 458 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 ROM1Q03395 351 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 TLE4Q04727 773 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 ECH1Q13011 328 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 TAF13Q15543 124 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 KLHL22Q53GT1 634 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 ZNF684Q5T5D7 378 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 RFPL4BQ6ZWI9 263 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 AHSA2Q719I0 299 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 KRT77Q7Z794 578 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 ZNF101Q8IZC7 436 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 ACBD7Q8N6N7 88 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 ASB17Q8WXJ9 295 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 C14orf79Q96F83 325 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 MRM2Q9UI43 246 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 LRRC42Q9Y546 428 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 LRP12Q9Y561 859 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 PCDHGB1Q9Y5G3 927 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 ATP23Q9Y6H3 246 aa17.28■□□□□ 0.36
SHKBP1-222ENST00000600320 EFCAB10A6NFE3 127 aa17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 E7EQL1 145 aa17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 FADS2O95864 444 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 NGFP01138 241 aa17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 PIPP12273 146 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 GRB2P62993 217 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 NKX6-1P78426 367 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 LHFPL3Q86UP9 236 aa17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 ZNF786Q8N393 782 aa17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 C4orf45Q96LM5 186 aa17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 ELOVL3Q9HB03 270 aa17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 PAK1IP1Q9NWT1 392 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 CNOT2Q9NZN8 540 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 IKZF2Q9UKS7 526 aa17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 GRIP1Q9Y3R0 1128 aa17.27■□□□□ 0.36
SHKBP1-222ENST00000600320 ABCA4P78363 2273 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 DAPL1A0PJW8 107 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 C5orf63A6NC05 138 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 M0R135 149 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 GPRIN2O60269 458 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 SMPD2O60906 423 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 ABHD16AO95870 558 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 CCDC159P0C7I6 412 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 SLC2A1P11166 492 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 NR4A1P22736 598 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 ERVS71-1P61550 626 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 EGR3Q06889 387 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 SNTB2Q13425 540 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 MSMPQ1L6U9 139 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 KCTD18Q6PI47 426 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 PLEKHG7Q6ZR37 379 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 RHOUQ7L0Q8 258 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 ZNF679Q8IYX0 411 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 ZNF540Q8NDQ6 660 aa17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 AKAP1Q92667 903 aaKnown RBP eCLIP17.26■□□□□ 0.35
SHKBP1-222ENST00000600320 SPTSSAQ969W0 71 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms