RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 MARS2Q96GW9 593 aaKnown RBP11.91□□□□□ -0.5
CLIP3-205ENST00000592017 PITX2Q99697 317 aa11.91□□□□□ -0.5
CLIP3-205ENST00000592017 RBM4Q9BWF3 364 aaKnown RBP11.91□□□□□ -0.5
CLIP3-205ENST00000592017 HDHD2Q9H0R4 259 aa11.91□□□□□ -0.5
CLIP3-205ENST00000592017 POFUT1Q9H488 388 aa11.91□□□□□ -0.5
CLIP3-205ENST00000592017 MED20Q9H944 212 aa11.91□□□□□ -0.5
CLIP3-205ENST00000592017 HINT3Q9NQE9 182 aaKnown RBP11.91□□□□□ -0.5
CLIP3-205ENST00000592017 CMC2Q9NRP2 79 aa11.91□□□□□ -0.5
CLIP3-205ENST00000592017 MRPL22Q9NWU5 206 aaKnown RBP11.91□□□□□ -0.5
CLIP3-205ENST00000592017 AP4S1Q9Y587 144 aa11.91□□□□□ -0.5
CLIP3-205ENST00000592017 LYNX1G3V0Z9 82 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 EBAG9O00559 213 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 MT-ND5P03915 603 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 SPARCP09486 303 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 LYNX1P0DP58 116 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 SPI1P17947 270 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 PAICSP22234 425 aaKnown RBP11.9□□□□□ -0.5
CLIP3-205ENST00000592017 FASP25445 335 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 GGT2P36268 569 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 SLC25A1P53007 311 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 CYB5R2Q6BCY4 276 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 SLC18B1Q6NT16 456 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 AMIGO2Q86SJ2 522 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 KLF14Q8TD94 323 aaPredicted RBP11.9□□□□□ -0.5
CLIP3-205ENST00000592017 UBASH3BQ8TF42 649 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 DDOQ99489 341 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 COQ7Q99807 217 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 PAPOLBQ9NRJ5 636 aaKnown RBP11.9□□□□□ -0.5
CLIP3-205ENST00000592017 ATPIF1Q9UII2 106 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 COMMD3-BMI1R4GMX3 469 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 SVEP1Q4LDE5 3571 aa11.9□□□□□ -0.5
CLIP3-205ENST00000592017 PLSCR5A0PG75 271 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 C17orf100A8MU93 164 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 TPD52L2O43399 206 aaKnown RBP11.89□□□□□ -0.51
CLIP3-205ENST00000592017 TIMM8AO60220 97 aaPredicted RBP11.89□□□□□ -0.51
CLIP3-205ENST00000592017 NCR1O76036 304 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 IGHV3-13P01766 116 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 HPXP02790 462 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 PSKH1P11801 424 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 FCGR1AP12314 374 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 ZNF23P17027 643 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 FMO3P31513 532 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 MAGEB1P43366 347 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 HIST1H3AP68431 136 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 MOGQ16653 247 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 TMEM255AQ5JRV8 349 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 HIST2H3PS2Q5TEC6 136 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 MBNL2Q5VZF2 373 aaKnown RBP11.89□□□□□ -0.51
CLIP3-205ENST00000592017 TMEM236Q5W0B7 351 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 ACSM5Q6NUN0 579 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 HIST2H3AQ71DI3 136 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 C1orf174Q8IYL3 243 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 ZNF511Q8NB15 262 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 LRTOMTQ8WZ04 291 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 NRBF2Q96F24 287 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 PLEKHA8Q96JA3 519 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 ATF6BQ99941 703 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 HCAR1Q9BXC0 346 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 NMNAT2Q9BZQ4 307 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 BPESC1Q9GZL8 116 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 OR51V1Q9H2C8 321 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 WDR76Q9H967 626 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 TBCCD1Q9NVR7 557 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 CYB5R1Q9UHQ9 305 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 KCNG2Q9UJ96 466 aa11.89□□□□□ -0.51
CLIP3-205ENST00000592017 STAB1Q9NY15 2570 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 PRR23D1E9PI22 279 aaPredicted RBP11.88□□□□□ -0.51
CLIP3-205ENST00000592017 F5H5K5 113 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 G3V2T6 193 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 H3BSA7 217 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 SPRY3O43610 288 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 ICMTO60725 284 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 PRR23D2P0DMB1 279 aaPredicted RBP11.88□□□□□ -0.51
CLIP3-205ENST00000592017 ZNF16P17020 682 aaPredicted RBP11.88□□□□□ -0.51
CLIP3-205ENST00000592017 GIFP27352 417 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 RGS6P49758 472 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 ENTPD1P49961 510 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 DAPP51397 102 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 ZNF81P51508 661 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 CCL8P80075 99 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 KPNB1Q14974 876 aaKnown RBP11.88□□□□□ -0.51
CLIP3-205ENST00000592017 TSTQ16762 297 aaKnown RBP11.88□□□□□ -0.51
CLIP3-205ENST00000592017 PLBD1Q6P4A8 553 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 FAHD1Q6P587 224 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 DCXRQ7Z4W1 244 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 ERI1Q8IV48 349 aaKnown RBP11.88□□□□□ -0.51
CLIP3-205ENST00000592017 ZNF786Q8N393 782 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 PYDC1Q8WXC3 89 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 DNAJC9Q8WXX5 260 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 MAP6Q96JE9 813 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 DCLRE1CQ96SD1 692 aaKnown RBP11.88□□□□□ -0.51
CLIP3-205ENST00000592017 TEX12Q9BXU0 123 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 SEMA6AQ9H2E6 1030 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 KRT84Q9NSB2 600 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 PTTG3PQ9NZH4 202 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 STARD10Q9Y365 291 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 MXRA5Q9NR99 2828 aa11.88□□□□□ -0.51
CLIP3-205ENST00000592017 LRP5LA4QPB2 252 aa11.87□□□□□ -0.51
CLIP3-205ENST00000592017 ZSCAN5BA6NJL1 495 aa11.87□□□□□ -0.51
CLIP3-205ENST00000592017 SURF4O15260 269 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms