RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SLC25A1P53007 311 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 TPTEP56180 551 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 RPS7P62081 194 aaKnown RBP8.63□□□□□ -1.03
BRCA1-227ENST00000591849 CCNIQ14094 377 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 TSTQ16762 297 aaKnown RBP8.63□□□□□ -1.03
BRCA1-227ENST00000591849 PCGF3Q3KNV8 242 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 KLHL12Q53G59 568 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 ACSM5Q6NUN0 579 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 RFPL4BQ6ZWI9 263 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 ZNF511Q8NB15 262 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 KLF14Q8TD94 323 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-227ENST00000591849 IPCEF1Q8WWN9 437 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-227ENST00000591849 LRTOMTQ8WZ04 291 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 RDH5Q92781 318 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 SPTSSAQ969W0 71 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 CMBLQ96DG6 245 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 MARS2Q96GW9 593 aaKnown RBP8.63□□□□□ -1.03
BRCA1-227ENST00000591849 RAB3IPQ96QF0 476 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-227ENST00000591849 ATF6BQ99941 703 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 PRRG3Q9BZD7 231 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 EGLN1Q9GZT9 426 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 MED20Q9H944 212 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 CMC2Q9NRP2 79 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 CYSLTR2Q9NS75 346 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 KRT84Q9NSB2 600 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 CENPMQ9NSP4 180 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 ATPIF1Q9UII2 106 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 STARD10Q9Y365 291 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 LHFPL6Q9Y693 200 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 IGLV3-9A0A075B6K5 115 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 FAM183AA6NL82 134 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 C17orf100A8MU93 164 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 H3BSA7 217 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 LCATP04180 440 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 DBHP09172 617 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 HOXB4P17483 251 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-227ENST00000591849 TNFSF4P23510 183 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 NR4A2P43354 598 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 SLC6A9P48067 706 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 CRISP1P54107 249 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 HIST1H3AP68431 136 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 CCL8P80075 99 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 MALLQ13021 153 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 SNAPC1Q16533 368 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 ZMAT1Q5H9K5 638 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 ZNF362Q5T0B9 420 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-227ENST00000591849 HIST2H3PS2Q5TEC6 136 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 MBNL2Q5VZF2 373 aaKnown RBP8.62□□□□□ -1.03
BRCA1-227ENST00000591849 TMEM236Q5W0B7 351 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 SLC18B1Q6NT16 456 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 PLBD1Q6P4A8 553 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 HIST2H3AQ71DI3 136 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 ASRGL1Q7L266 308 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 DCXRQ7Z4W1 244 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 ERI1Q8IV48 349 aaKnown RBP8.62□□□□□ -1.03
BRCA1-227ENST00000591849 ZNF786Q8N393 782 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 OR6N2Q8NGY6 317 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 PTP4A1Q93096 173 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 UTP4Q969X6 686 aaKnown RBP8.62□□□□□ -1.03
BRCA1-227ENST00000591849 APOBEC3DQ96AK3 386 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-227ENST00000591849 INTS14Q96SY0 518 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 DDOQ99489 341 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 COPS4Q9BT78 406 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 RBM4Q9BWF3 364 aaKnown RBP8.62□□□□□ -1.03
BRCA1-227ENST00000591849 HCAR1Q9BXC0 346 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 SEMA6AQ9H2E6 1030 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 NTN4Q9HB63 628 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 YAE1D1Q9NRH1 226 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 TVP23BQ9NYZ1 205 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 PTTG3PQ9NZH4 202 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 H2AFY2Q9P0M6 372 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-227ENST00000591849 CYB5R1Q9UHQ9 305 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 ENOPH1Q9UHY7 261 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 N6AMT1Q9Y5N5 214 aa8.62□□□□□ -1.03
BRCA1-227ENST00000591849 SAC3D1A6NKF1 404 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 LYNX1G3V0Z9 82 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 PPIHO43447 177 aaKnown RBP8.61□□□□□ -1.03
BRCA1-227ENST00000591849 CDC14BO60729 498 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 GLCEO94923 617 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 HPXP02790 462 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 LYNX1P0DP58 116 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 CLUP10909 449 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 GGT2P36268 569 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 RPS27P42677 84 aaKnown RBP8.61□□□□□ -1.03
BRCA1-227ENST00000591849 MAGEB1P43366 347 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 SLC15A1P46059 708 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 GPR6P46095 362 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-227ENST00000591849 DAPP51397 102 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 CDK5Q00535 292 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 LOXL1Q08397 574 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-227ENST00000591849 EIF2B1Q14232 305 aaKnown RBP8.61□□□□□ -1.03
BRCA1-227ENST00000591849 KPNB1Q14974 876 aaKnown RBP8.61□□□□□ -1.03
BRCA1-227ENST00000591849 CYB5R2Q6BCY4 276 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 ZFP1Q6P2D0 407 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 CFAP77Q6ZQR2 320 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 DNM1P46Q6ZS02 220 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 SPATC1Q76KD6 591 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 SHFQ7M4L6 423 aa8.61□□□□□ -1.03
BRCA1-227ENST00000591849 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-227ENST00000591849 CPOQ8IVL8 374 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms