RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 WNT5BQ9H1J7 359 aa15.07■□□□□ 0
TOP3A-220ENST00000585031 CACYBPQ9HB71 228 aaKnown RBP15.07■□□□□ 0
TOP3A-220ENST00000585031 NOX4Q9NPH5 578 aa15.07■□□□□ 0
TOP3A-220ENST00000585031 LRRC42Q9Y546 428 aa15.07■□□□□ 0
TOP3A-220ENST00000585031 SLC2A10O95528 541 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 CH25HO95992 272 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 MT-ATP6P00846 226 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 LIPAP38571 399 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 RPL15P61313 204 aaKnown RBP15.06■□□□□ 0
TOP3A-220ENST00000585031 FGF12P61328 243 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 ZNF74Q16587 644 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 VMACQ2NL98 169 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 BTNL3Q6UXE8 466 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 ZNF620Q6ZNG0 422 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 TSPYL5Q86VY4 417 aaPredicted RBP15.06■□□□□ 0
TOP3A-220ENST00000585031 KLBQ86Z14 1044 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 SLC30A8Q8IWU4 369 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 C11orf65Q8NCR3 313 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 PAPD5Q8NDF8 572 aaKnown RBP15.06■□□□□ 0
TOP3A-220ENST00000585031 OR2Z1Q8NG97 314 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 NFKBIDQ8NI38 313 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 SLCO4A1Q96BD0 722 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 SEPHS2Q99611 448 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 ZNF184Q99676 751 aaPredicted RBP15.06■□□□□ 0
TOP3A-220ENST00000585031 SLC30A2Q9BRI3 323 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 TMEM27Q9HBJ8 222 aa15.06■□□□□ 0
TOP3A-220ENST00000585031 EIF3KQ9UBQ5 218 aaKnown RBP15.06■□□□□ 0
TOP3A-220ENST00000585031 TIMM8AO60220 97 aaPredicted RBP15.05■□□□□ -0
TOP3A-220ENST00000585031 GPR137BO60478 399 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 OR6A2O95222 327 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 ACADSP16219 412 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 PEX2P28328 305 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 GDI2P50395 445 aaKnown RBP15.05■□□□□ -0
TOP3A-220ENST00000585031 ZNF133P52736 654 aaPredicted RBP15.05■□□□□ -0
TOP3A-220ENST00000585031 CLRN1P58418 232 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 ERVK-25P63136 954 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 GCNT6Q5T4J0 391 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 IZUMO2Q6UXV1 221 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 FKBP9P1Q75LS8 142 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 ZNF420Q8TAQ5 688 aaPredicted RBP15.05■□□□□ -0
TOP3A-220ENST00000585031 NMD3Q96D46 503 aaKnown RBP15.05■□□□□ -0
TOP3A-220ENST00000585031 NUDT16L1Q9BRJ7 211 aaKnown RBP15.05■□□□□ -0
TOP3A-220ENST00000585031 CDADC1Q9BWV3 514 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 MAGIXQ9H6Y5 334 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 SIAEQ9HAT2 523 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 GCM1Q9NP62 436 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 THUMPD1Q9NXG2 353 aaKnown RBP15.05■□□□□ -0
TOP3A-220ENST00000585031 RPS6KA6Q9UK32 745 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 SAMD4AQ9UPU9 718 aaKnown RBP15.05■□□□□ -0
TOP3A-220ENST00000585031 PPP1R3CQ9UQK1 317 aa15.05■□□□□ -0
TOP3A-220ENST00000585031 TMEM247A6NEH6 219 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 ICMTO60725 284 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 TRMUO75648 421 aaKnown RBP15.04■□□□□ -0
TOP3A-220ENST00000585031 TIPRLO75663 272 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 IGHV4-59P01825 116 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 IGHG1P01857 330 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 SFTPBP07988 381 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 RAP2AP10114 183 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 RPS2P15880 293 aaKnown RBP15.04■□□□□ -0
TOP3A-220ENST00000585031 MMP16P51512 607 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 RGS8P57771 180 aaPredicted RBP15.04■□□□□ -0
TOP3A-220ENST00000585031 FMODQ06828 376 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 FAM201AQ5SY85 155 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 C10orf128Q5T292 105 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 INTS11Q5TA45 600 aaKnown RBP15.04■□□□□ -0
TOP3A-220ENST00000585031 LPCAT4Q643R3 524 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 Q6ZSV7 163 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 NOXO1Q8NFA2 376 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 LRTOMTQ8WZ04 291 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 OR2V2Q96R30 315 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 TMEM246Q9BRR3 403 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 C8orf4Q9NR00 106 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 DCAF13Q9NV06 445 aaKnown RBP15.04■□□□□ -0
TOP3A-220ENST00000585031 SELENONQ9NZV5 590 aa15.04■□□□□ -0
TOP3A-220ENST00000585031 CGGBP1Q9UFW8 167 aaPredicted RBP15.04■□□□□ -0
TOP3A-220ENST00000585031 C22orf46C9J442 243 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 CYB5R3P00387 301 aaPredicted RBP15.03■□□□□ -0
TOP3A-220ENST00000585031 ASAH2BP0C7U1 165 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 HSPA13P48723 471 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 ZNF84P51523 738 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 LOXL3P58215 753 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 BPIFB3P59826 476 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 GNB2P62879 340 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 MRPS34P82930 218 aaKnown RBP15.03■□□□□ -0
TOP3A-220ENST00000585031 NPTX1Q15818 432 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 FAM189A2Q15884 450 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 C2orf68Q2NKX9 166 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 SLC27A4Q6P1M0 643 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 LYPD2Q6UXB3 125 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 ASB10Q8WXI3 467 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 EME1Q96AY2 570 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 CENPNQ96H22 339 aaPredicted RBP15.03■□□□□ -0
TOP3A-220ENST00000585031 ZNF607Q96SK3 696 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 SLC19A3Q9BZV2 496 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 OR2H1Q9GZK4 316 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 CCNB1IP1Q9NPC3 277 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 POMT1Q9Y6A1 747 aa15.03■□□□□ -0
TOP3A-220ENST00000585031 C5orf58C9J3I9 102 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 H3BSA7 217 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 TNFRSF13BO14836 293 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms