RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 EFNB2P52799 333 aa10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 MTPNP58546 118 aa10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 EMX1Q04741 257 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 COX10Q12887 443 aa10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 BEND6Q5SZJ8 279 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 PATL1Q86TB9 770 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 MOGAT3Q86VF5 341 aa10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 RBM45Q8IUH3 476 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 SLC30A8Q8IWU4 369 aa10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 OR10AD1Q8NGE0 317 aa10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 ADAMTS16Q8TE57 1224 aa10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 MPP4Q96JB8 637 aa10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 CGREF1Q99674 301 aa10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 SIAEQ9HAT2 523 aa10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 NDUFAF1Q9Y375 327 aa10.87□□□□□ -0.67
CDK5RAP3-213ENST00000579605 SACSQ9NZJ4 4579 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 BLOC1S5-TXNDC5H3BN57 136 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 ANGPT2O15123 496 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 LYPD3O95274 346 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 SLC2A10O95528 541 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 THY1P04216 161 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 LIPFP07098 398 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 FBP1P09467 338 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 CD247P20963 164 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 ERFP50548 548 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 PRB3Q04118 309 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 NFYCQ13952 458 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 SELPLGQ14242 412 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 CD276Q5ZPR3 534 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 NANOGNBQ7Z5D8 188 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 ALDH16A1Q8IZ83 802 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 OR4D11Q8NGI4 311 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 PPP1R35Q8TAP8 253 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 NSMAFQ92636 917 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 MEGF10Q96KG7 1140 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 B9D2Q9BPU9 175 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 SIRPDQ9H106 197 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 WNT5BQ9H1J7 359 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 MMADHCQ9H3L0 296 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 DNAJB11Q9UBS4 358 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 TENM2Q9NT68 2774 aa10.86□□□□□ -0.67
CDK5RAP3-213ENST00000579605 A0A1W2PRG6 482 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 LRRC30A6NM36 301 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 MCIDASD6RGH6 385 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 RNASEK-C17orf49H0YIS7 233 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 C3orf84H3BNL1 204 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 ABHD16AO95870 558 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 ASAH2BP0C7U1 165 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 CD28P10747 220 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 PMELP40967 661 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 KRTAP10-11P60412 298 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 INTS11Q5TA45 600 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 ARL9Q6T311 187 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 DCDC5Q6ZRR9 648 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 HDDC2Q7Z4H3 204 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 DPP10Q8N608 796 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 PNLDC1Q8NA58 520 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 OR4F17Q8NGA8 305 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 RASSF5Q8WWW0 418 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 TAMM41Q96BW9 452 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 OR4F4Q96R69 305 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 OR2H1Q9GZK4 316 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 CNTD2Q9H8S5 307 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 ZNRD1Q9P1U0 126 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 ERVK-18Q9QC07 812 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 TMCC3Q9ULS5 477 aa10.85□□□□□ -0.67
CDK5RAP3-213ENST00000579605 F13BP05160 661 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 IRF2P14316 349 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 KITLGP21583 273 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 SRP9P49458 86 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 DAP3P51398 398 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 MRPS34P82930 218 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 HOXA4Q00056 320 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 LY6EQ16553 131 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 C1orf94Q6P1W5 598 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 TSPYL5Q86VY4 417 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 C1orf87Q8N0U7 546 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 SPERTQ8NA61 448 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 NOXO1Q8NFA2 376 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 OR4C13Q8NGP0 309 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 OR10A6Q8NH74 314 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 OR2T6Q8NHC8 308 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 NABP1Q96AH0 204 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 ZNF426Q9BUY5 554 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 PCDHAC1Q9H158 963 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 KAT8Q9H7Z6 458 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 STX18Q9P2W9 335 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 STARD10Q9Y365 291 aa10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 CAB39Q9Y376 341 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP3-213ENST00000579605 CENPBD1B2RD01 187 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 F5H5P2 479 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 FBXO24O75426 580 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 TRMUO75648 421 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 OR7A10O76100 309 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 MT-ND1P03886 318 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 ACADSP16219 412 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 FUT1P19526 365 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 LAP3P28838 519 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 PSMB10P40306 273 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 KIR2DS4P43632 304 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms