RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 OR2T2Q6IF00 324 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 CORO6Q6QEF8 472 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 SMARCD3Q6STE5 483 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 DPY19L2P2Q6ZN68 376 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 USP43Q70EL4 1123 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 C3orf56Q8N813 242 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 BHLHE23Q8NDY6 225 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 OR5L1Q8NGL2 311 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 ZNF420Q8TAQ5 688 aaPredicted RBP7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PTP4A1Q93096 173 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 HAVCR1Q96D42 359 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 GPX7Q96SL4 187 aaPredicted RBP7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 RBM4Q9BWF3 364 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 WDR76Q9H967 626 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 SRA1Q9HD15 236 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 TUBG2Q9NRH3 451 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 DCAF13Q9NV06 445 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 VSX1Q9NZR4 365 aaPredicted RBP7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 ABCD2Q9UBJ2 740 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PPIAL4AQ9Y536 164 aa7.77□□□□□ -1.17
CDK5RAP3-211ENST00000578996 OR6C6A6NF89 314 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 DCTN6O00399 190 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 OR10H3O60404 316 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 RENP00797 406 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 RAC2P15153 192 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 FPR2P25090 351 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 SLC6A6P31641 620 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 RGS6P49758 472 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 MMP16P51512 607 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PRSS12P56730 875 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 FXYD6P3P58550 94 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 ZMYND11Q15326 602 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 ESCO2Q56NI9 601 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 RBMS3Q6XE24 437 aaKnown RBP7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 ZNF283Q8N7M2 679 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 SDR9C7Q8NEX9 313 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 GJC3Q8NFK1 279 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 OR4K13Q8NH42 304 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 FAM216AQ8WUB2 273 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 APOBEC3DQ96AK3 386 aaPredicted RBP7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 MCUR1Q96AQ8 359 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 C7orf34Q96L11 122 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 ZNF582Q96NG8 517 aaPredicted RBP7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 NMNAT3Q96T66 252 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 GPA33Q99795 319 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 MRI1Q9BV20 369 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 IFT27Q9BW83 186 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 CDADC1Q9BWV3 514 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 NSRP1Q9H0G5 558 aaKnown RBP7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 OR52D1Q9H346 318 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 FN3KQ9H479 309 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PATZ1Q9HBE1 687 aaKnown RBP7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 RPRD1BQ9NQG5 326 aaKnown RBP7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 MMP26Q9NRE1 261 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 DDX28Q9NUL7 540 aaKnown RBP7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 OPN4Q9UHM6 478 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 AUP1Q9Y679 476 aa7.76□□□□□ -1.17
CDK5RAP3-211ENST00000578996 F5H5K5 113 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 H0YL77 283 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 TRAPPC2LH3BP13 241 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 TMEM178BH3BS89 294 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 TXNDC12O95881 172 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 CYB5R3P00387 301 aaPredicted RBP7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 FABP3P05413 133 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 RPS2P15880 293 aaKnown RBP7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 MSX2P35548 267 aaPredicted RBP7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 MDH2P40926 338 aaKnown RBP7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 SRP9P49458 86 aaKnown RBP7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 SMIM11AP58511 58 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 GABPB1Q06547 395 aaPredicted RBP7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 ZNF154Q13106 437 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 RFX4Q33E94 735 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 TMEM155Q4W5P6 130 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 SLC27A4Q6P1M0 643 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PGM2L1Q6PCE3 622 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 LRRC28Q86X40 367 aaPredicted RBP7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 LINC00346Q8IVM7 164 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 MUC20Q8N307 709 aaPredicted RBP7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 DEFB108BQ8NET1 73 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 OR8G5Q8NG78 346 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 OR2AJ1Q8NGZ0 328 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 OR13G1Q8NGZ3 307 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 POP5Q969H6 163 aaKnown RBP7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PYURFQ96I23 114 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 MEGF10Q96KG7 1140 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 DUX5Q96PT3 197 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 SIGLEC11Q96RL6 698 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PITX2Q99697 317 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 COQ7Q99807 217 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 HCAR1Q9BXC0 346 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 PLA2G12AQ9BZM1 189 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 HDHD2Q9H0R4 259 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 MYLK2Q9H1R3 596 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 NTN4Q9HB63 628 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 GCM1Q9NP62 436 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 ESM1Q9NQ30 184 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 OR5V1Q9UGF6 321 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 ATPIF1Q9UII2 106 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 MAGEL2Q9UJ55 1249 aa7.75□□□□□ -1.17
CDK5RAP3-211ENST00000578996 TMCC3Q9ULS5 477 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms