RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 C1orf94Q6P1W5 598 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 DLEU7Q6UYE1 221 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 FBXW12Q6X9E4 464 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 DHDDSQ86SQ9 333 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 MOGAT3Q86VF5 341 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 NKAIN4Q8IVV8 208 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 CLDN22Q8N7P3 220 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 PNLDC1Q8NA58 520 aaKnown RBP11.11□□□□□ -0.63
COPS3-214ENST00000577246 OR11L1Q8NGX0 322 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 C10orf82Q8WW14 230 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 TAMM41Q96BW9 452 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 TECTBQ96PL2 329 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 CCDC28BQ9BUN5 200 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 CDADC1Q9BWV3 514 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 ATPIF1Q9UII2 106 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 RIMS3Q9UJD0 308 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 BAG5Q9UL15 447 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 SH3GLB1Q9Y371 365 aa11.11□□□□□ -0.63
COPS3-214ENST00000577246 CMYA5Q8N3K9 4069 aa11.1□□□□□ -0.63
COPS3-214ENST00000577246 BTBD17A6NE02 478 aa11.1□□□□□ -0.63
COPS3-214ENST00000577246 AHCYL1O43865 530 aa11.1□□□□□ -0.63
COPS3-214ENST00000577246 MTPNP58546 118 aa11.1□□□□□ -0.63
COPS3-214ENST00000577246 CTXN1P60606 82 aa11.1□□□□□ -0.63
COPS3-214ENST00000577246 ANKDD1AQ495B1 522 aa11.1□□□□□ -0.63
COPS3-214ENST00000577246 LDLRAD3Q86YD5 345 aa11.1□□□□□ -0.63
COPS3-214ENST00000577246 CELF2-AS1Q8N7Q2 184 aa11.1□□□□□ -0.63
COPS3-214ENST00000577246 SCCPDHQ8NBX0 429 aa11.1□□□□□ -0.63
COPS3-214ENST00000577246 CGREF1Q99674 301 aa11.1□□□□□ -0.63
COPS3-214ENST00000577246 KAT8Q9H7Z6 458 aaKnown RBP11.1□□□□□ -0.63
COPS3-214ENST00000577246 TRIM36Q9NQ86 728 aa11.1□□□□□ -0.63
COPS3-214ENST00000577246 ERVK-18Q9QC07 812 aa11.1□□□□□ -0.63
COPS3-214ENST00000577246 CAB39Q9Y376 341 aaPredicted RBP11.1□□□□□ -0.63
COPS3-214ENST00000577246 IGHV1-69DA0A0B4J2H0 117 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 CENPVL3A0A0U1RRI6 287 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 OR6C6A6NF89 314 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 C22orf46C9J442 243 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 XKRYO14609 159 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 ANGPT2O15123 496 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 PIP5K1CO60331 668 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 IGHV1-69P01742 117 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 SFTPBP07988 381 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 PSMB10P40306 273 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 GATA4P43694 442 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 IER3P46695 156 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 ERFP50548 548 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 DHRS7BQ6IAN0 325 aaPredicted RBP11.09□□□□□ -0.63
COPS3-214ENST00000577246 OR2T2Q6IF00 324 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 ZNF841Q6ZN19 808 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 CCDC80Q76M96 950 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 DPP10Q8N608 796 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 ZSCAN4Q8NAM6 433 aaPredicted RBP11.09□□□□□ -0.63
COPS3-214ENST00000577246 OR1F12Q8NHA8 337 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 Q8TCH9 128 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 APOBEC3DQ96AK3 386 aaPredicted RBP11.09□□□□□ -0.63
COPS3-214ENST00000577246 BPIFA2Q96DR5 249 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 C7orf26Q96N11 449 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 WDFY2Q96P53 400 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 HCAR1Q9BXC0 346 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 NDEL1Q9GZM8 345 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 MMADHCQ9H3L0 296 aaPredicted RBP11.09□□□□□ -0.63
COPS3-214ENST00000577246 C16orf95Q9H693 158 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 EMC7Q9NPA0 242 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 TMEM100Q9NV29 134 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 PTTG3PQ9NZH4 202 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 GRHPRQ9UBQ7 328 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 NDUFAF1Q9Y375 327 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 NOP16Q9Y3C1 178 aaKnown RBP11.09□□□□□ -0.63
COPS3-214ENST00000577246 FAM96BQ9Y3D0 163 aa11.09□□□□□ -0.63
COPS3-214ENST00000577246 IQCF6A8MYZ5 107 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 F5H5P2 479 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 NDUFA2O43678 99 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 IFNA14P01570 189 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 IGHV4-59P01825 116 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 IFI30P13284 250 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 MMP9P14780 707 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 FPR3P25089 353 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 IDH3AP50213 366 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 LSM6P62312 80 aaKnown RBP11.08□□□□□ -0.64
COPS3-214ENST00000577246 ST3GAL3Q11203 375 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 PIN1Q13526 163 aaPredicted RBP11.08□□□□□ -0.64
COPS3-214ENST00000577246 VMACQ2NL98 169 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 BEAN1Q3B7T3 259 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 C11orf91Q3C1V1 193 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 IGFN1Q86VF2 1251 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 GALNT4Q8N4A0 578 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 LRRC8CQ8TDW0 803 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 ZNF583Q96ND8 569 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 TBX15Q96SF7 602 aa11.08□□□□□ -0.64
COPS3-214ENST00000577246 TEX13CA0A0J9YWL9 993 aa11.07□□□□□ -0.64
COPS3-214ENST00000577246 IGHV3-64DA0A0J9YX35 117 aa11.07□□□□□ -0.64
COPS3-214ENST00000577246 ELOVL7A1L3X0 281 aa11.07□□□□□ -0.64
COPS3-214ENST00000577246 H0YL77 283 aa11.07□□□□□ -0.64
COPS3-214ENST00000577246 FBP2O00757 339 aa11.07□□□□□ -0.64
COPS3-214ENST00000577246 MLNRO43193 412 aa11.07□□□□□ -0.64
COPS3-214ENST00000577246 NFYCQ13952 458 aa11.07□□□□□ -0.64
COPS3-214ENST00000577246 FAM201AQ5SY85 155 aa11.07□□□□□ -0.64
COPS3-214ENST00000577246 KPRPQ5T749 579 aaPredicted RBP11.07□□□□□ -0.64
COPS3-214ENST00000577246 LYPD2Q6UXB3 125 aa11.07□□□□□ -0.64
COPS3-214ENST00000577246 Q6ZSV7 163 aa11.07□□□□□ -0.64
COPS3-214ENST00000577246 OAFQ86UD1 273 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms