RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 MYCBPQ99417 103 aaPredicted RBP14.79□□□□□ -0.04
NUP88-210ENST00000574867 INPP5EQ9NRR6 644 aa14.79□□□□□ -0.04
NUP88-210ENST00000574867 A0A1W2PQL4 384 aaPredicted RBP14.78□□□□□ -0.04
NUP88-210ENST00000574867 EFCAB10A6NFE3 127 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 FAM20BO75063 409 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 CTAG2O75638 210 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 IGHA1P01876 353 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 CCL2P13500 99 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 CCNOP22674 350 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 SSTR2P30874 369 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 OTX1P32242 354 aaPredicted RBP14.78□□□□□ -0.04
NUP88-210ENST00000574867 EGR3Q06889 387 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 ZNF322Q6U7Q0 402 aaPredicted RBP14.78□□□□□ -0.04
NUP88-210ENST00000574867 ZNF704Q6ZNC4 412 aaPredicted RBP14.78□□□□□ -0.04
NUP88-210ENST00000574867 KRT77Q7Z794 578 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 BPIFB6Q8NFQ5 453 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 TBX5Q99593 518 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 JAM3Q9BX67 310 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 MROQ9BYG7 248 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 NIPAL2Q9H841 368 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 EIF3KQ9UBQ5 218 aaKnown RBP14.78□□□□□ -0.04
NUP88-210ENST00000574867 J3QW42 95 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 SLC1A7O00341 560 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 ZNF254O75437 659 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 APOC1P02654 83 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 H2BFMP0C1H6 154 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 CCDC159P0C7I6 412 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 HSD11B1P28845 292 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 RGS6P49758 472 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 TPTEP56180 551 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 MED21Q13503 144 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 PAQR4Q8N4S7 273 aaPredicted RBP14.78□□□□□ -0.04
NUP88-210ENST00000574867 NUP37Q8NFH4 326 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 KBTBD8Q8NFY9 601 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 OR52I1Q8NGK6 324 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 MRPL48Q96GC5 212 aaKnown RBP14.78□□□□□ -0.04
NUP88-210ENST00000574867 OR8B4Q96RC9 309 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 KCNJ15Q99712 375 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 FGF20Q9NP95 211 aaPredicted RBP14.78□□□□□ -0.04
NUP88-210ENST00000574867 SCN3BQ9NY72 215 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 PSORS1C1Q9UIG5 152 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 POU2F3Q9UKI9 436 aa14.78□□□□□ -0.04
NUP88-210ENST00000574867 HEATR1Q9H583 2144 aaKnown RBP14.78□□□□□ -0.04
NUP88-210ENST00000574867 DAPL1A0PJW8 107 aa14.77□□□□□ -0.04
NUP88-210ENST00000574867 SHISA9B4DS77 424 aa14.77□□□□□ -0.04
NUP88-210ENST00000574867 M0R135 149 aa14.77□□□□□ -0.04
NUP88-210ENST00000574867 XPNPEP2O43895 674 aa14.77□□□□□ -0.04
NUP88-210ENST00000574867 DCKP27707 260 aa14.77□□□□□ -0.04
NUP88-210ENST00000574867 SPATC1Q76KD6 591 aa14.77□□□□□ -0.04
NUP88-210ENST00000574867 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.77□□□□□ -0.04
NUP88-210ENST00000574867 C1orf174Q8IYL3 243 aa14.77□□□□□ -0.04
NUP88-210ENST00000574867 ZNF679Q8IYX0 411 aa14.77□□□□□ -0.04
NUP88-210ENST00000574867 ZNF295-AS1Q8N0V1 137 aa14.77□□□□□ -0.04
NUP88-210ENST00000574867 RFLNBQ8N5W9 214 aa14.77□□□□□ -0.04
NUP88-210ENST00000574867 SLC7A6Q92536 515 aa14.77□□□□□ -0.04
NUP88-210ENST00000574867 ZNF799Q96GE5 643 aa14.77□□□□□ -0.04
NUP88-210ENST00000574867 ELOVL3Q9HB03 270 aa14.77□□□□□ -0.04
NUP88-210ENST00000574867 F5H5K5 113 aa14.77□□□□□ -0.05
NUP88-210ENST00000574867 ABHD16AO95870 558 aa14.77□□□□□ -0.05
NUP88-210ENST00000574867 DBHP09172 617 aa14.77□□□□□ -0.05
NUP88-210ENST00000574867 NR4A1P22736 598 aa14.77□□□□□ -0.05
NUP88-210ENST00000574867 RPS23P62266 143 aaKnown RBP14.77□□□□□ -0.05
NUP88-210ENST00000574867 TLE4Q04727 773 aa14.77□□□□□ -0.05
NUP88-210ENST00000574867 DRAM2Q6UX65 266 aa14.77□□□□□ -0.05
NUP88-210ENST00000574867 LRRN1Q6UXK5 716 aa14.77□□□□□ -0.05
NUP88-210ENST00000574867 C4orf45Q96LM5 186 aa14.77□□□□□ -0.05
NUP88-210ENST00000574867 CLEC4MQ9H2X3 399 aaPredicted RBP14.77□□□□□ -0.05
NUP88-210ENST00000574867 IKZF2Q9UKS7 526 aa14.77□□□□□ -0.05
NUP88-210ENST00000574867 DIMT1Q9UNQ2 313 aaKnown RBP14.77□□□□□ -0.05
NUP88-210ENST00000574867 MYRFQ9Y2G1 1151 aa14.77□□□□□ -0.05
NUP88-210ENST00000574867 LRP12Q9Y561 859 aa14.77□□□□□ -0.05
NUP88-210ENST00000574867 CADP27708 2225 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 KRT8P05787 483 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 ACSM4P0C7M7 580 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 DCTDP32321 178 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 RAD52P43351 418 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 ACTA2P62736 377 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 ACTG2P63267 376 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 SNTB2Q13425 540 aaKnown RBP14.76□□□□□ -0.05
NUP88-210ENST00000574867 RSPO1Q2MKA7 263 aaPredicted RBP14.76□□□□□ -0.05
NUP88-210ENST00000574867 TMEM200AQ86VY9 491 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 ZNF540Q8NDQ6 660 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 SNX33Q8WV41 574 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 GGHQ92820 318 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 DOK1Q99704 481 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 TTTY10Q9BZA0 68 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 BCL2L14Q9BZR8 327 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 TBCCD1Q9NVR7 557 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 FKBP14Q9NWM8 211 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 SLCO1C1Q9NYB5 712 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 BLOC1S6Q9UL45 172 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 TPRKBQ9Y3C4 175 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 GRIP1Q9Y3R0 1128 aa14.76□□□□□ -0.05
NUP88-210ENST00000574867 PRR32B1ATL7 298 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 SMPD2O60906 423 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 SULT1C4O75897 302 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 WNT5AP41221 380 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 RIDAP52758 137 aaKnown RBP14.75□□□□□ -0.05
NUP88-210ENST00000574867 UCP2P55851 309 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 NKX6-1P78426 367 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms