RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ZNF45Q02386 682 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 BSPH1Q075Z2 132 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 BNIP2Q12982 314 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 FLOT2Q14254 428 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 PRPSAP1Q14558 356 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 RAB35Q15286 201 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 TAB1Q15750 504 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 ZNF672Q499Z4 452 aaPredicted RBP4.53□□□□□ -1.68
SF3B3-214ENST00000572365 RBM48Q5RL73 367 aaKnown RBP4.53□□□□□ -1.68
SF3B3-214ENST00000572365 ANKRD26P1Q6NSI1 321 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 ANGPTL8Q6UXH0 198 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 STAC2Q6ZMT1 411 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 NRARPQ7Z6K4 114 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 SMIM29Q86T20 159 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 CARM1Q86X55 608 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 C9orf40Q8IXQ3 194 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 PARP8Q8N3A8 854 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 SVOPLQ8N434 492 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 PRELID2Q8N945 189 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 OR52N5Q8NH56 324 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 ZNF721Q8TF20 911 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 PHLDA1Q8WV24 401 aaPredicted RBP4.53□□□□□ -1.68
SF3B3-214ENST00000572365 MYDGFQ969H8 173 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 LRRC39Q96DD0 335 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 SENP5Q96HI0 755 aaPredicted RBP4.53□□□□□ -1.68
SF3B3-214ENST00000572365 SH3YL1Q96HL8 342 aaPredicted RBP4.53□□□□□ -1.68
SF3B3-214ENST00000572365 TSNARE1Q96NA8 513 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 EBNA1BP2Q99848 306 aaKnown RBP4.53□□□□□ -1.68
SF3B3-214ENST00000572365 C9orf16Q9BUW7 83 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 CHID1Q9BWS9 393 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 PRRG4Q9BZD6 226 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 ACTR6Q9GZN1 396 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 PPA2Q9H2U2 334 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 POLE3Q9NRF9 147 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 IARS2Q9NSE4 1012 aaKnown RBP4.53□□□□□ -1.68
SF3B3-214ENST00000572365 B3GNT2Q9NY97 397 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 TRMT6Q9UJA5 497 aaKnown RBP4.53□□□□□ -1.68
SF3B3-214ENST00000572365 LEF1Q9UJU2 399 aaPredicted RBP4.53□□□□□ -1.68
SF3B3-214ENST00000572365 TFR2Q9UP52 801 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 TENM2Q9NT68 2774 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 A0A0U1RQK1 487 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 A0A1W2PPW3 197 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF320A2RRD8 509 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 A4D1N5 150 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 ANKRD61A6NGH8 418 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 M0R3G1 203 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 CCRL2O00421 344 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 COPEO14579 308 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 DNALI1O14645 258 aaPredicted RBP4.52□□□□□ -1.69
SF3B3-214ENST00000572365 PRMT5O14744 637 aaPredicted RBP4.52□□□□□ -1.69
SF3B3-214ENST00000572365 NDUFA2O43678 99 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 FCGR3BO75015 233 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 PSIP1O75475 530 aaKnown RBP4.52□□□□□ -1.69
SF3B3-214ENST00000572365 OR7A10O76100 309 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 CRYAAP02489 173 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF3P17036 446 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 ME2P23368 584 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 HPCAL1P37235 193 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 DDOSTP39656 456 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 CDKN2BP42772 138 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 RPS5P46782 204 aaKnown RBP4.52□□□□□ -1.69
SF3B3-214ENST00000572365 YAP1P46937 504 aaKnown RBP4.52□□□□□ -1.69
SF3B3-214ENST00000572365 MARCKSL1P49006 195 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 SERPINB9P50453 376 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 LHX2P50458 406 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 SUCLG1P53597 346 aaKnown RBP4.52□□□□□ -1.69
SF3B3-214ENST00000572365 PLA2G16P53816 162 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 PSMD4P55036 377 aaKnown RBP4.52□□□□□ -1.69
SF3B3-214ENST00000572365 KRTAP10-11P60412 298 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 GABARAPL2P60520 117 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 COPZ1P61923 177 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 TBPL1P62380 186 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 STX4Q12846 297 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF718Q3SXZ3 478 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 FAM76BQ5HYJ3 339 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 WDR38Q5JTN6 314 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 LPCAT4Q643R3 524 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 TIGD3Q6B0B8 471 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 C17orf64Q86WR6 236 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 RCOR2Q8IZ40 523 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 STX19Q8N4C7 294 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 LRRC17Q8N6Y2 441 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 NHLRC2Q8NBF2 726 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 FNDC9Q8TBE3 224 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 LRRC20Q8TCA0 184 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 PYDC1Q8WXC3 89 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 C22orf15Q8WYQ4 148 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 PIK3R3Q92569 461 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 S100PBPQ96BU1 408 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 ARL5BQ96KC2 179 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 RDH12Q96NR8 316 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 QKIQ96PU8 341 aaKnown RBP eCLIP4.52□□□□□ -1.69
SF3B3-214ENST00000572365 PELOQ9BRX2 385 aaKnown RBP4.52□□□□□ -1.69
SF3B3-214ENST00000572365 NMUR2Q9GZQ4 415 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 P2RY12Q9H244 342 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 UBQLN3Q9H347 655 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 CAB39LQ9H9S4 337 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 LPAR2Q9HBW0 351 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 DDX28Q9NUL7 540 aaKnown RBP4.52□□□□□ -1.69
SF3B3-214ENST00000572365 DNAJC11Q9NVH1 559 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms