RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 TMEM123Q8N131 208 aa15.33■□□□□ 0.04
RPAIN-208ENST00000571043 RBMXL3Q8N7X1 1067 aaKnown RBP15.33■□□□□ 0.04
RPAIN-208ENST00000571043 TMEM178AQ8NBL3 297 aa15.33■□□□□ 0.04
RPAIN-208ENST00000571043 OR4M2Q8NGB6 313 aa15.33■□□□□ 0.04
RPAIN-208ENST00000571043 OR51A4Q8NGJ6 313 aa15.33■□□□□ 0.04
RPAIN-208ENST00000571043 OR6N1Q8NGY5 312 aa15.33■□□□□ 0.04
RPAIN-208ENST00000571043 OR2AJ1Q8NGZ0 328 aa15.33■□□□□ 0.04
RPAIN-208ENST00000571043 NIPAL2Q9H841 368 aa15.33■□□□□ 0.04
RPAIN-208ENST00000571043 GDF2Q9UK05 429 aaPredicted RBP15.33■□□□□ 0.04
RPAIN-208ENST00000571043 FBXL3Q9UKT7 428 aa15.33■□□□□ 0.04
RPAIN-208ENST00000571043 GTF2A1LQ9UNN4 478 aa15.33■□□□□ 0.04
RPAIN-208ENST00000571043 DHDHQ9UQ10 334 aa15.33■□□□□ 0.04
RPAIN-208ENST00000571043 TP53TG5Q9Y2B4 290 aa15.33■□□□□ 0.04
RPAIN-208ENST00000571043 EMC9Q9Y3B6 208 aa15.33■□□□□ 0.04
RPAIN-208ENST00000571043 LHFPL6Q9Y693 200 aa15.33■□□□□ 0.04
RPAIN-208ENST00000571043 NBEAQ8NFP9 2946 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 NCKAP5O14513 1909 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 IGHV3-15A0A0B4J1V0 119 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 TMEM269A0A1B0GVZ9 245 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 HPNP05981 417 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 CD2P06729 351 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 FAM87AP0C7U9 286 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 POU3F2P20265 443 aaPredicted RBP15.32■□□□□ 0.04
RPAIN-208ENST00000571043 SCAND1P57086 179 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 LSM6P62312 80 aaKnown RBP15.32■□□□□ 0.04
RPAIN-208ENST00000571043 PITPNAQ00169 270 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 MADCAM1Q13477 382 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 ODF4Q2M2E3 257 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 HES5Q5TA89 166 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 TMEM244Q5VVB8 128 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 HACD4Q5VWC8 232 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 NRARPQ7Z6K4 114 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 ZIC4Q8N9L1 334 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 LGALS14Q8TCE9 139 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 ZNF385AQ96PM9 386 aaKnown RBP15.32■□□□□ 0.04
RPAIN-208ENST00000571043 NEURL2Q9BR09 285 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 WACQ9BTA9 647 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 HHLA2Q9UM44 414 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 FOXJ3Q9UPW0 622 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 POLR1DQ9Y2S0 133 aa15.32■□□□□ 0.04
RPAIN-208ENST00000571043 TRAV8-7A0A075B6U6 113 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 A0A0B4J203 849 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 ANXA2P2A6NMY6 339 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 PLA2G10O15496 165 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 UBL3O95164 117 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 ANXA2P07355 339 aaKnown RBP15.31■□□□□ 0.04
RPAIN-208ENST00000571043 HNRNPCP07910 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
RPAIN-208ENST00000571043 UBCP0CG48 685 aaKnown RBP15.31■□□□□ 0.04
RPAIN-208ENST00000571043 PDSS1Q5T2R2 415 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 OR10S1Q8NGN2 331 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 ASB5Q8WWX0 329 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 PPP1R14AQ96A00 147 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 C11orf54Q9H0W9 315 aaPredicted RBP15.31■□□□□ 0.04
RPAIN-208ENST00000571043 ZNF703Q9H7S9 590 aaPredicted RBP15.31■□□□□ 0.04
RPAIN-208ENST00000571043 EMC7Q9NPA0 242 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 FAM206AQ9NX38 181 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 FOXD3Q9UJU5 478 aaPredicted RBP15.31■□□□□ 0.04
RPAIN-208ENST00000571043 CAMK2AQ9UQM7 478 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 RCE1Q9Y256 329 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 ETV7Q9Y603 341 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 ZNF407Q9C0G0 2248 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 MED12Q93074 2177 aa15.31■□□□□ 0.04
RPAIN-208ENST00000571043 EPG5Q9HCE0 2579 aa15.3■□□□□ 0.04
RPAIN-208ENST00000571043 ZNF878C9JN71 531 aa15.3■□□□□ 0.04
RPAIN-208ENST00000571043 H0YC42 278 aa15.3■□□□□ 0.04
RPAIN-208ENST00000571043 FSTP19883 344 aa15.3■□□□□ 0.04
RPAIN-208ENST00000571043 CDAP32320 146 aa15.3■□□□□ 0.04
RPAIN-208ENST00000571043 GUCA1AP43080 201 aaPredicted RBP15.3■□□□□ 0.04
RPAIN-208ENST00000571043 ZNF169Q14929 603 aaPredicted RBP15.3■□□□□ 0.04
RPAIN-208ENST00000571043 BCL2L15Q5TBC7 163 aa15.3■□□□□ 0.04
RPAIN-208ENST00000571043 ABLIM2Q6H8Q1 611 aa15.3■□□□□ 0.04
RPAIN-208ENST00000571043 C20orf196Q8IYI0 205 aa15.3■□□□□ 0.04
RPAIN-208ENST00000571043 ZFP62Q8NB50 900 aaPredicted RBP15.3■□□□□ 0.04
RPAIN-208ENST00000571043 MOB1AQ9H8S9 216 aa15.3■□□□□ 0.04
RPAIN-208ENST00000571043 SPTA1P02549 2419 aa15.3■□□□□ 0.04
RPAIN-208ENST00000571043 DHHO43323 396 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 CXCL13O43927 109 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 SSX4O60224 188 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 MSR1P21757 451 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 INPP1P49441 399 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 HYAL4Q2M3T9 481 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 MZT2BQ6NZ67 158 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 CFAP77Q6ZQR2 320 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 ELMOD2Q8IZ81 293 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 OR10D3Q8NH80 312 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 CPNE4Q96A23 557 aaPredicted RBP15.29■□□□□ 0.04
RPAIN-208ENST00000571043 RFT1Q96AA3 541 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 ZC3HAV1LQ96H79 300 aaKnown RBP15.29■□□□□ 0.04
RPAIN-208ENST00000571043 ABCG5Q9H222 651 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 LIN7BQ9HAP6 207 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 CKLFQ9UBR5 152 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 ATRXP46100 2492 aa15.29■□□□□ 0.04
RPAIN-208ENST00000571043 LINC00854A0A1B0GVQ3 168 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 LOC107986453A0A1B0GWG9 222 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 ZNF716A6NP11 495 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 CTDSPLO15194 276 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 MAS1P04201 325 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 IGFBP3P17936 291 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-208ENST00000571043 MAP2K3P46734 347 aa15.28■□□□□ 0.04
RPAIN-208ENST00000571043 EIF1AXP47813 144 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms