RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 TSPEARQ8WU66 669 aa12.34□□□□□ -0.43
USB1-214ENST00000568848 HAVCR1Q96D42 359 aa12.34□□□□□ -0.43
USB1-214ENST00000568848 Q96M85 177 aa12.34□□□□□ -0.43
USB1-214ENST00000568848 ALG12Q9BV10 488 aa12.34□□□□□ -0.43
USB1-214ENST00000568848 MAN2C1Q9NTJ4 1040 aa12.34□□□□□ -0.43
USB1-214ENST00000568848 UFSP2Q9NUQ7 469 aa12.34□□□□□ -0.43
USB1-214ENST00000568848 HIF3AQ9Y2N7 669 aa12.34□□□□□ -0.43
USB1-214ENST00000568848 A0A0U1RQK1 487 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 H3BSA7 217 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 J3KTA2 159 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 SGCEO43556 437 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 GPR137BO60478 399 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 NDUFA7O95182 113 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 CTLA4P16410 223 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 CFHR2P36980 270 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 POU4F2Q12837 409 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 KLF10Q13118 480 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 MEP1BQ16820 701 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 VMACQ2NL98 169 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 MESTQ5EB52 335 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 GPR157Q5UAW9 335 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 SFRP4Q6FHJ7 346 aaPredicted RBP12.33□□□□□ -0.44
USB1-214ENST00000568848 PATL1Q86TB9 770 aaKnown RBP12.33□□□□□ -0.44
USB1-214ENST00000568848 MUC20Q8N307 709 aaPredicted RBP12.33□□□□□ -0.44
USB1-214ENST00000568848 NPEPL1Q8NDH3 523 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 OR8B3Q8NGG8 313 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 C10orf82Q8WW14 230 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 RBP7Q96R05 134 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 OR8B2Q96RD0 313 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 EVA1AQ9H8M9 152 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 SMURF1Q9HCE7 757 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 TBCCD1Q9NVR7 557 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 DNAJB11Q9UBS4 358 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 IL20RAQ9UHF4 553 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 NDRG4Q9ULP0 352 aaKnown RBP12.33□□□□□ -0.44
USB1-214ENST00000568848 MED31Q9Y3C7 131 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 SNX13Q9Y5W8 968 aa12.33□□□□□ -0.44
USB1-214ENST00000568848 CENPVL3A0A0U1RRI6 287 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 SLC22A31A6NKX4 558 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 C12orf71A8MTZ7 269 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 C3orf80F5H4A9 247 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 RER1O15258 196 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 OR5F1O95221 314 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 SLC9A3P48764 834 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 PROK1P58294 105 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 PCBD1P61457 104 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 MPPED2Q15777 294 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 OCLNQ16625 522 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 NANOGP8Q6NSW7 305 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 TBPL2Q6SJ96 375 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 UNQ6126/PRO20091Q6UXV3 157 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 HDDC2Q7Z4H3 204 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 NRMQ8IXM6 262 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 RASD2Q96D21 266 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 BPIFA2Q96DR5 249 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 TECTBQ96PL2 329 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 MMADHCQ9H3L0 296 aaPredicted RBP12.32□□□□□ -0.44
USB1-214ENST00000568848 PRDM13Q9H4Q3 707 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 SAR1AQ9NR31 198 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 ASH2LQ9UBL3 628 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 CLN8Q9UBY8 286 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 MIOXQ9UGB7 285 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 DNAH3Q8TD57 4116 aa12.32□□□□□ -0.44
USB1-214ENST00000568848 LOC100653049A0A140TA62 436 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 A0A1B0GW55 424 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 FAM20BO75063 409 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 KRT34O76011 436 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 DUX4L2P0CJ85 424 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 DUX4L3P0CJ86 424 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 DUX4L4P0CJ87 422 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 DUX4L5P0CJ88 424 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 DUX4L6P0CJ89 424 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 DUX4L7P0CJ90 424 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 PPIAL4GP0DN37 164 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 MMP9P14780 707 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 RBM34P42696 430 aaKnown RBP12.31□□□□□ -0.44
USB1-214ENST00000568848 GPR4P46093 362 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 CYLC2Q14093 348 aaPredicted RBP12.31□□□□□ -0.44
USB1-214ENST00000568848 TAF9Q16594 264 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 HSP90B2PQ58FF3 399 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 CORO6Q6QEF8 472 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 DUX4L9Q6RFH8 374 aaPredicted RBP12.31□□□□□ -0.44
USB1-214ENST00000568848 Q6ZSV7 163 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 ZER1Q7Z7L7 766 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 LIPHQ8WWY8 451 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 LHX4Q969G2 390 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 TCF7L1Q9HCS4 588 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 DUX4Q9UBX2 424 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 A4GNTQ9UNA3 340 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 NOTCH3Q9UM47 2321 aa12.31□□□□□ -0.44
USB1-214ENST00000568848 A0A1W2PRD5 423 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 A0A1W2PRF3 423 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 A0A1W2PRM7 423 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 OR6C6A6NF89 314 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 FXYD1O00168 92 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 CDC42EP2O14613 210 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 MRASO14807 208 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 TIMM23O14925 209 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 SCRN3Q0VDG4 424 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 MAB21L1Q13394 359 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms