RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 PTP4A1Q93096 173 aa11.45□□□□□ -0.58
CLK3-213ENST00000563842 PITX2Q99697 317 aa11.45□□□□□ -0.58
CLK3-213ENST00000563842 RBM4Q9BWF3 364 aaKnown RBP11.45□□□□□ -0.58
CLK3-213ENST00000563842 CHODLQ9H9P2 273 aa11.45□□□□□ -0.58
CLK3-213ENST00000563842 CMC2Q9NRP2 79 aa11.45□□□□□ -0.58
CLK3-213ENST00000563842 DECR2Q9NUI1 292 aa11.45□□□□□ -0.58
CLK3-213ENST00000563842 KIF17Q9P2E2 1029 aa11.45□□□□□ -0.58
CLK3-213ENST00000563842 CYB5R1Q9UHQ9 305 aa11.45□□□□□ -0.58
CLK3-213ENST00000563842 ZDHHC8Q9ULC8 765 aa11.45□□□□□ -0.58
CLK3-213ENST00000563842 DYSFO75923 2080 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 SONP18583 2426 aaKnown RBP11.44□□□□□ -0.58
CLK3-213ENST00000563842 TPD52L2O43399 206 aaKnown RBP11.44□□□□□ -0.58
CLK3-213ENST00000563842 TIMM8AO60220 97 aaPredicted RBP11.44□□□□□ -0.58
CLK3-213ENST00000563842 HPXP02790 462 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 HMGN1P05114 100 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 FCGR1AP12314 374 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 FASP25445 335 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 POU1F1P28069 291 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 PYCR1P32322 319 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 MPV17P39210 176 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 GZMKP49863 264 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 ERFP50548 548 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 TMEM33P57088 247 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 OTPQ5XKR4 325 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 CYB5R2Q6BCY4 276 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 SLC18B1Q6NT16 456 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 CORO6Q6QEF8 472 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 CCDC121Q6ZUS5 278 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 APOBEC3DQ96AK3 386 aaPredicted RBP11.44□□□□□ -0.58
CLK3-213ENST00000563842 SLCO4A1Q96BD0 722 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 BPESC1Q9GZL8 116 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 EGLN1Q9GZT9 426 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 STARD10Q9Y365 291 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 TANC2Q9HCD6 1990 aa11.44□□□□□ -0.58
CLK3-213ENST00000563842 FN1P02751 2386 aaKnown RBP11.43□□□□□ -0.58
CLK3-213ENST00000563842 TIPRLO75663 272 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 ADH4P08319 380 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 RAC2P15153 192 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 ZNF23P17027 643 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 SPI1P17947 270 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 GGT2P36268 569 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 ENTPD1P49961 510 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 MMP15P51511 669 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 CHN2P52757 468 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 TPTEP56180 551 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 CCL8P80075 99 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 KRTAP1-1Q07627 177 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 RIN1Q13671 783 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 GINS1Q14691 196 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 HIPK1Q86Z02 1210 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 LINC00346Q8IVM7 164 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 OR9Q1Q8NGQ5 310 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 OR5K1Q8NHB7 308 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 SLC7A6Q92536 515 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 SPTSSAQ969W0 71 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 DUS3LQ96G46 650 aaKnown RBP11.43□□□□□ -0.58
CLK3-213ENST00000563842 PLEKHA8Q96JA3 519 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 ATF6BQ99941 703 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 NMNAT2Q9BZQ4 307 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 SAP30LQ9HAJ7 183 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 MRPL22Q9NWU5 206 aaKnown RBP11.43□□□□□ -0.58
CLK3-213ENST00000563842 AP4S1Q9Y587 144 aa11.43□□□□□ -0.58
CLK3-213ENST00000563842 TVP23AA6NH52 213 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 PRR23D1E9PI22 279 aaPredicted RBP11.42□□□□□ -0.58
CLK3-213ENST00000563842 DBHP09172 617 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 TACSTD2P09758 323 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 PRR23D2P0DMB1 279 aaPredicted RBP11.42□□□□□ -0.58
CLK3-213ENST00000563842 KITLGP21583 273 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 PRKACGP22612 351 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 TNFSF4P23510 183 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 CRYBB2P43320 205 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 MAGEB1P43366 347 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 GPR6P46095 362 aaPredicted RBP11.42□□□□□ -0.58
CLK3-213ENST00000563842 PSG7Q13046 419 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 ATP6AP1Q15904 470 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 TEX30Q5JUR7 227 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 FBXW12Q6X9E4 464 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 CFAP77Q6ZQR2 320 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 HS3ST5Q8IZT8 346 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 OR51L1Q8NGJ5 315 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 OR6K6Q8NGW6 343 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 UTP4Q969X6 686 aaKnown RBP11.42□□□□□ -0.58
CLK3-213ENST00000563842 OTULINQ96BN8 352 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 HAVCR1Q96D42 359 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 ELMOD3Q96FG2 381 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 C1QTNF5Q9BXJ0 243 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 YAE1D1Q9NRH1 226 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 PURGQ9UJV8 347 aaKnown RBP11.42□□□□□ -0.58
CLK3-213ENST00000563842 COMMD3-BMI1R4GMX3 469 aa11.42□□□□□ -0.58
CLK3-213ENST00000563842 IGHV4-61A0A0C4DH41 118 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 IGHV1-69-2A0A0G2JMI3 117 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 A8MV72 311 aaPredicted RBP11.41□□□□□ -0.58
CLK3-213ENST00000563842 INAFM1C9JVW0 142 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 F5H5K5 113 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 LYNX1G3V0Z9 82 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 ZNF593O00488 134 aaPredicted RBP11.41□□□□□ -0.58
CLK3-213ENST00000563842 EBAG9O00559 213 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 SURF4O15260 269 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 SPRY3O43610 288 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 NCR1O76036 304 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms