RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 KDELR2P33947 212 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 APLNRP35414 380 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 CRATP43155 626 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 ADARB1P78563 741 aaKnown RBP8.28□□□□□ -1.08
TPM1-225ENST00000560679 TNFAIP6P98066 277 aaPredicted RBP8.28□□□□□ -1.08
TPM1-225ENST00000560679 RGNQ15493 299 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 ZNF718Q3SXZ3 478 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 SLC36A2Q495M3 483 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 LRRC23Q53EV4 343 aaPredicted RBP8.28□□□□□ -1.08
TPM1-225ENST00000560679 CYBRD1Q53TN4 286 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 ESCO2Q56NI9 601 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 PABPC1L2AQ5JQF8 200 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 SAMD5Q5TGI4 173 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 RUSC1-AS1Q66K80 236 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 TBPL2Q6SJ96 375 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 ZDHHC13Q8IUH4 622 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 C11orf65Q8NCR3 313 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 OR1J2Q8NGS2 313 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 ZDHHC16Q969W1 377 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 POM121L2Q96KW2 1035 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 YIPF3Q9GZM5 350 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 ARMC7Q9H6L4 198 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 TCF7L1Q9HCS4 588 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 ASH2LQ9UBL3 628 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 ZNF232Q9UNY5 417 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 IFT52Q9Y366 437 aa8.28□□□□□ -1.08
TPM1-225ENST00000560679 A0A0B4J2E0 115 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 IQCMA0A1B0GVH7 501 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 A0A1B0GX12 115 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 GNGT2O14610 69 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 TPST2O60704 377 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 PTHP01270 115 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 ALPLP05186 524 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 TFAP2AP05549 437 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 QDPRP09417 244 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 GNAO1P09471 354 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 WNT2P09544 360 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 CCNOP22674 350 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 AHCYP23526 432 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 STOMP27105 288 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 FADDQ13158 208 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 CDK5R2Q13319 367 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 PDCD1Q15116 288 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 HIST3H3Q16695 136 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 C2orf68Q2NKX9 166 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 NRN1LQ496H8 165 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 GCNT6Q5T4J0 391 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 FAM205BPQ63HN1 556 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 LRRN1Q6UXK5 716 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 ZNF620Q6ZNG0 422 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 Q6ZR03 302 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 CBLL1Q75N03 491 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 SLC35D2Q76EJ3 337 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 DPPA2Q7Z7J5 298 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 PATL1Q86TB9 770 aaKnown RBP8.27□□□□□ -1.09
TPM1-225ENST00000560679 ZDHHC21Q8IVQ6 265 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 LRRC18Q8N456 261 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 TMEM86BQ8N661 226 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 TSPAN14Q8NG11 270 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 OR5J2Q8NH18 312 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 DNAJA4Q8WW22 397 aaPredicted RBP8.27□□□□□ -1.09
TPM1-225ENST00000560679 MAL2Q969L2 176 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 ZNF566Q969W8 418 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 HSH2DQ96JZ2 352 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 ZNF347Q96SE7 839 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 EPYCQ99645 322 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 WFDC6Q9BQY6 131 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 SSBP3Q9BWW4 388 aaPredicted RBP8.27□□□□□ -1.09
TPM1-225ENST00000560679 GABARAPL1Q9H0R8 117 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 POFUT1Q9H488 388 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 BCL2L10Q9HD36 194 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 NOX4Q9NPH5 578 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 CYSLTR2Q9NS75 346 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 CGGBP1Q9UFW8 167 aaPredicted RBP8.27□□□□□ -1.09
TPM1-225ENST00000560679 ZDHHC8Q9ULC8 765 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 PLXNB1O43157 2135 aa8.27□□□□□ -1.09
TPM1-225ENST00000560679 TET2Q6N021 2002 aaPredicted RBP8.26□□□□□ -1.09
TPM1-225ENST00000560679 C5orf49A4QMS7 147 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 C5orf63A6NC05 138 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 TRIM64CA6NLI5 447 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 G3V2T6 193 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 H3BSA7 217 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 GPR137BO60478 399 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 ICMTO60725 284 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 E2F6O75461 281 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 FABP3P05413 133 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 ADORA3P0DMS8 318 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 PRKAR1BP31321 381 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 MDH2P40926 338 aaKnown RBP8.26□□□□□ -1.09
TPM1-225ENST00000560679 MMP16P51512 607 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 RPL15P61313 204 aaKnown RBP8.26□□□□□ -1.09
TPM1-225ENST00000560679 FGF12P61328 243 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 HSF2Q03933 536 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 PLP2Q04941 152 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 RFX4Q33E94 735 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 OR2T5Q6IEZ7 315 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 ULK3Q6PHR2 472 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 TTC33Q6PID6 262 aaPredicted RBP8.26□□□□□ -1.09
TPM1-225ENST00000560679 DHRS4L2Q6PKH6 230 aa8.26□□□□□ -1.09
TPM1-225ENST00000560679 BTNL3Q6UXE8 466 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms