RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 OCLNQ16625 522 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 ZNF181Q2M3W8 571 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 TTMPQ5BVD1 217 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 GPR139Q6DWJ6 353 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 OR2T2Q6IF00 324 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 PGM2L1Q6PCE3 622 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 C17orf107Q6ZR85 190 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 TMPRSS11FQ6ZWK6 438 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 MBOAT2Q6ZWT7 520 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 FKBP9P1Q75LS8 142 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 SPATC1Q76KD6 591 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 GLB1L2Q8IW92 636 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 GJC3Q8NFK1 279 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 OR13C2Q8NGS9 318 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 ZNF420Q8TAQ5 688 aaPredicted RBP7.68□□□□□ -1.18
HDDC3-204ENST00000559834 MEGF10Q96KG7 1140 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 Q96M85 177 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 ZNF570Q96NI8 536 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 NUDT16L1Q9BRJ7 211 aaKnown RBP7.68□□□□□ -1.18
HDDC3-204ENST00000559834 HCAR1Q9BXC0 346 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 RERGLQ9H628 205 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 NMNAT1Q9HAN9 279 aaPredicted RBP7.68□□□□□ -1.18
HDDC3-204ENST00000559834 NOX4Q9NPH5 578 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 TMEM100Q9NV29 134 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 KIF17Q9P2E2 1029 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 ASH2LQ9UBL3 628 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 CLN8Q9UBY8 286 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 TMEM5Q9Y2B1 443 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 COA3Q9Y2R0 106 aaPredicted RBP7.68□□□□□ -1.18
HDDC3-204ENST00000559834 POLR1DQ9Y2S0 133 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 ADAM18Q9Y3Q7 739 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 TENM1Q9UKZ4 2725 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 A0A087WUU8 490 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 GSTA4O15217 222 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 RER1O15258 196 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 NDUFB2O95178 105 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 ZNF205O95201 554 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 CYB5R3P00387 301 aaPredicted RBP7.67□□□□□ -1.18
HDDC3-204ENST00000559834 LIPFP07098 398 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 TROVE2P10155 538 aaKnown RBP eCLIP7.67□□□□□ -1.18
HDDC3-204ENST00000559834 CTLA4P16410 223 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 MDKP21741 143 aaPredicted RBP7.67□□□□□ -1.18
HDDC3-204ENST00000559834 CRABP1P29762 137 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 SDHAP31040 664 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 RBMXP38159 391 aaKnown RBP7.67□□□□□ -1.18
HDDC3-204ENST00000559834 PITPNBP48739 271 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 KLF10Q13118 480 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 HNRNPA0Q13151 305 aaKnown RBP7.67□□□□□ -1.18
HDDC3-204ENST00000559834 HLXQ14774 488 aaPredicted RBP7.67□□□□□ -1.18
HDDC3-204ENST00000559834 ZNF404Q494X3 552 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 MIDNQ504T8 468 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 IFI44LQ53G44 452 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 CCDC92Q53HC0 331 aaPredicted RBP7.67□□□□□ -1.18
HDDC3-204ENST00000559834 MESTQ5EB52 335 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 GPR157Q5UAW9 335 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 DNM1P34Q6PK57 102 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 TBPL2Q6SJ96 375 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 ARPINQ7Z6K5 226 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 ADCK1Q86TW2 530 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 CYP4Z1Q86W10 505 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 POU5F2Q8N7G0 328 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 OR10S1Q8NGN2 331 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 OR11L1Q8NGX0 322 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 OR4F5Q8NH21 305 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 SLC7A6Q92536 515 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 ERGIC1Q969X5 290 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 FAM71F1Q96KD3 344 aaPredicted RBP7.67□□□□□ -1.18
HDDC3-204ENST00000559834 COQ7Q99807 217 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 SLC30A2Q9BRI3 323 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 TMEM246Q9BRR3 403 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 TMEM120AQ9BXJ8 343 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 HDHD2Q9H0R4 259 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 PRDM13Q9H4Q3 707 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 ANKRD19PQ9H560 264 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 PTTG3PQ9NZH4 202 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 FAM32AQ9Y421 112 aaKnown RBP7.67□□□□□ -1.18
HDDC3-204ENST00000559834 SNX13Q9Y5W8 968 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 TANC2Q9HCD6 1990 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 ANK2Q01484 3957 aa7.67□□□□□ -1.18
HDDC3-204ENST00000559834 DOCK11Q5JSL3 2073 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 TRAV40A0A0B4J280 105 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 FAM181BA6NEQ2 426 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 IQCF6A8MYZ5 107 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 SRRM5B3KS81 715 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 F5H5P2 479 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 H0YL77 283 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 J3KTA2 159 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 CDC42EP2O14613 210 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 PHYHO14832 338 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 FFAR1O14842 300 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 HOXA3O43365 443 aaPredicted RBP7.66□□□□□ -1.18
HDDC3-204ENST00000559834 ENSAO43768 121 aaKnown RBP7.66□□□□□ -1.18
HDDC3-204ENST00000559834 PTP4A3O75365 173 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 ZNF682O95780 498 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 DBHP09172 617 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 OMGP23515 440 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 FPR3P25089 353 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 GATA4P43694 442 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 GPR4P46093 362 aa7.66□□□□□ -1.18
HDDC3-204ENST00000559834 CENPAP49450 140 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms