RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CSF3P09919 207 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 GKN3PP0CG01 181 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 GOLGA8HP0CJ92 632 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 GIMD1P0DJR0 217 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 IGKV1-13P0DP09 117 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 CNR1P21554 472 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 ZP3P21754 424 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 USF1P22415 310 aaPredicted RBP2.92□□□□□ -1.94
TDP1-217ENST00000557782 HAAOP46952 286 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 CDC34P49427 236 aaPredicted RBP2.92□□□□□ -1.94
TDP1-217ENST00000557782 RGS6P49758 472 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 XKP51811 444 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 MLF1P58340 268 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 TAS2R19P59542 299 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 CXCL6P80162 114 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 PITPNAQ00169 270 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 PAX8Q06710 450 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 DYNC1I2Q13409 638 aaKnown RBP2.92□□□□□ -1.94
TDP1-217ENST00000557782 AQP6Q13520 282 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 FLOT2Q14254 428 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 PRPSAP1Q14558 356 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 QPRTQ15274 297 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 ZBTB6Q15916 424 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 BSXQ3C1V8 233 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 PRR30Q53SZ7 412 aaPredicted RBP2.92□□□□□ -1.94
TDP1-217ENST00000557782 PAGE3Q5JUK9 113 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 RBM48Q5RL73 367 aaKnown RBP2.92□□□□□ -1.94
TDP1-217ENST00000557782 RESP18Q5W5W9 173 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 THOC7Q6I9Y2 204 aaKnown RBP2.92□□□□□ -1.94
TDP1-217ENST00000557782 FRMPD2BQ6IN97 320 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 C8orf74Q6P047 294 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 CLEC18BQ6UXF7 455 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 COX15Q7KZN9 410 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 SLC25A42Q86VD7 318 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 KLHDC8BQ8IXV7 354 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 BOD1L2Q8IYS8 172 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 FAM71AQ8IYT1 594 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 CA13Q8N1Q1 262 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 RNF10Q8N5U6 811 aaKnown RBP2.92□□□□□ -1.94
TDP1-217ENST00000557782 NKAPP1Q8N9T2 125 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 CHST4Q8NCG5 386 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 MDS2Q8NDY4 140 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 OR2Y1Q8NGV0 311 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 FANK1Q8TC84 345 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 PHF10Q8WUB8 498 aaKnown RBP2.92□□□□□ -1.94
TDP1-217ENST00000557782 TMEM234Q8WY98 164 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 FAM3DQ96BQ1 224 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 C18orf12Q96KH6 178 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 ZNF681Q96N22 645 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 RANBP9Q96S59 729 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 ZNF184Q99676 751 aaPredicted RBP2.92□□□□□ -1.94
TDP1-217ENST00000557782 WACQ9BTA9 647 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 ZDHHC11Q9H8X9 412 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 SLC25A22Q9H936 323 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 PSTPIP2Q9H939 334 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 WDR54Q9H977 334 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 C1orf109Q9NX04 203 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 APOBEC3BQ9UH17 382 aaKnown RBP2.92□□□□□ -1.94
TDP1-217ENST00000557782 NAGKQ9UJ70 344 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 ST3GAL6Q9Y274 331 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 ACOT9Q9Y305 439 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 STYXL1Q9Y6J8 313 aa2.92□□□□□ -1.94
TDP1-217ENST00000557782 IGHV3-35A0A0C4DH35 117 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 GOLGA6L10A6NI86 522 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 EPM2AB3EWF7 344 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 H3BNH8 94 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 KLRC4-KLRK1H3BQV0 150 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 M0QXV9 152 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 TOX3O15405 576 aaPredicted RBP2.91□□□□□ -1.94
TDP1-217ENST00000557782 EDIL3O43854 480 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 ZNF432O94892 652 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 RCBTB2O95199 551 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 UTS2O95399 124 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 ACTL6AO96019 429 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 TCP1P17987 556 aaKnown RBP2.91□□□□□ -1.94
TDP1-217ENST00000557782 LOXP28300 417 aaPredicted RBP2.91□□□□□ -1.94
TDP1-217ENST00000557782 GNRHRP30968 328 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 S100A5P33763 92 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 PFN2P35080 140 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 HRH1P35367 487 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 RPL18AQ02543 176 aaKnown RBP2.91□□□□□ -1.94
TDP1-217ENST00000557782 TCP10Q12799 353 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 TPBGQ13641 420 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 POU2AF1Q16633 256 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 RGS21Q2M5E4 152 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 CDKL4Q5MAI5 379 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 FHL5Q5TD97 284 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 ZNF658Q5TYW1 1059 aaPredicted RBP2.91□□□□□ -1.94
TDP1-217ENST00000557782 ANKRD22Q5VYY1 191 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 ZNF613Q6PF04 617 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 FAM220AQ7Z4H9 259 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 HSD17B13Q7Z5P4 300 aaPredicted RBP2.91□□□□□ -1.94
TDP1-217ENST00000557782 THOC6Q86W42 341 aaKnown RBP2.91□□□□□ -1.94
TDP1-217ENST00000557782 NAXDQ8IW45 347 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 BBS7Q8IWZ6 715 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 ARRDC1Q8N5I2 433 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 ATP6V1C2Q8NEY4 427 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 OR5AR1Q8NGP9 310 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 OR5AK3PQ8NH89 298 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 UBA3Q8TBC4 463 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms