RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CDK5R1Q15078 307 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 SMIM19Q96E16 107 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 KTI12Q96EK9 354 aaPredicted RBP11.6□□□□□ -0.55
CHD4-211ENST00000544484 ALKBH3Q96Q83 286 aaPredicted RBP11.6□□□□□ -0.55
CHD4-211ENST00000544484 DDOQ99489 341 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 A3GALT2U3KPV4 340 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 MCM3APO60318 1980 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 RPS10-NUDT3A0A1W2PQS6 291 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 RAF1P04049 648 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 TMEM11P17152 192 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 ETV6P41212 452 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 RPS10P46783 165 aaKnown RBP11.6□□□□□ -0.55
CHD4-211ENST00000544484 LGALS4P56470 323 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 HTRA4P83105 476 aaPredicted RBP11.6□□□□□ -0.55
CHD4-211ENST00000544484 PCK2Q16822 640 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 OR2B11Q5JQS5 317 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 OR2L13Q8N349 312 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 OR2I1PQ8NGU4 316 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 TCTEX1D2Q8WW35 142 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 HPSE2Q8WWQ2 592 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 INTS12Q96CB8 462 aaKnown RBP11.6□□□□□ -0.55
CHD4-211ENST00000544484 DAZAP1Q96EP5 407 aaKnown RBP11.6□□□□□ -0.55
CHD4-211ENST00000544484 NME1P15531 152 aaKnown RBP11.6□□□□□ -0.55
CHD4-211ENST00000544484 SRPXP78539 464 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 FZD2Q14332 565 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 Q6ZNX1 250 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 LGI3Q8N145 548 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 OR4C3Q8NH37 302 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 LILRB4Q8NHJ6 448 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 S100A11P31949 105 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 UBE2KP61086 200 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 LAIR1Q6GTX8 287 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 CMTM4Q8IZR5 234 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 CADM3Q8N126 398 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 RBMXL3Q8N7X1 1067 aaKnown RBP11.6□□□□□ -0.55
CHD4-211ENST00000544484 A4GNTQ9UNA3 340 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 NRASP01111 189 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 EIF4EP06730 217 aaKnown RBP11.6□□□□□ -0.55
CHD4-211ENST00000544484 PRR35P0CG20 571 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 GPR3P46089 330 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 SLC17A1Q14916 467 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 FXNQ16595 210 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 C2orf76Q3KRA6 126 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 OR10R2Q8NGX6 335 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 TINAGL1Q9GZM7 467 aaPredicted RBP11.6□□□□□ -0.55
CHD4-211ENST00000544484 PBOV1Q9GZY1 135 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 HIPK2Q9H2X6 1198 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 PTTG3PQ9NZH4 202 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 PPIL1Q9Y3C6 166 aa11.6□□□□□ -0.55
CHD4-211ENST00000544484 PPP1CAP62136 330 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 WFDC8Q8IUA0 241 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 OR51A4Q8NGJ6 313 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 OR51A2Q8NGJ7 313 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 ZNF2Q9BSG1 426 aaPredicted RBP11.59□□□□□ -0.55
CHD4-211ENST00000544484 PLA2G3Q9NZ20 509 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 MDFIC2A0A1B0GVS7 189 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 FOLR1P15328 257 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 TCTN1Q2MV58 587 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 WDR88Q6ZMY6 472 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 OR52N5Q8NH56 324 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 ZG16BQ96DA0 208 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 REEP6Q96HR9 211 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 DRD3P35462 400 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 FABP6P51161 128 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 HIST2H3PS2Q5TEC6 136 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 DHRS13Q6UX07 377 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 SYS1Q8N2H4 156 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 AKR7LQ8NHP1 331 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 SPACA9Q96E40 222 aaPredicted RBP11.59□□□□□ -0.55
CHD4-211ENST00000544484 SMOC1Q9H4F8 434 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 ERVMER34-1Q9H9K5 563 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 SIRT5Q9NXA8 310 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 ATP23Q9Y6H3 246 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 M0R1B8 84 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 AIPO00170 330 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 WDR1O75083 606 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 INSM1Q01101 510 aaPredicted RBP11.59□□□□□ -0.55
CHD4-211ENST00000544484 KIAA0040Q15053 153 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 SHBQ15464 509 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 ZNF547Q8IVP9 402 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 FAM109AQ8N4B1 249 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 DYNC2LI1Q8TCX1 351 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 SIAEQ9HAT2 523 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 GDF2Q9UK05 429 aaPredicted RBP11.59□□□□□ -0.55
CHD4-211ENST00000544484 FLVCR2Q9UPI3 526 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 B9D1Q9UPM9 204 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 ABCD3P28288 659 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 ZNF92Q03936 586 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 STAC2Q6ZMT1 411 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 SARAFQ96BY9 339 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 PLEKHF2Q9H8W4 249 aa11.59□□□□□ -0.55
CHD4-211ENST00000544484 IFITM5A6NNB3 132 aa11.58□□□□□ -0.55
CHD4-211ENST00000544484 C17orf112F2Z3M2 114 aa11.58□□□□□ -0.55
CHD4-211ENST00000544484 WNT3P56703 355 aa11.58□□□□□ -0.55
CHD4-211ENST00000544484 FOXB2Q5VYV0 432 aa11.58□□□□□ -0.55
CHD4-211ENST00000544484 C16orf47Q6ZP98 133 aaPredicted RBP11.58□□□□□ -0.55
CHD4-211ENST00000544484 SSX9Q7RTT3 188 aa11.58□□□□□ -0.55
CHD4-211ENST00000544484 CALHM3Q86XJ0 350 aa11.58□□□□□ -0.55
CHD4-211ENST00000544484 SLC7A6Q92536 515 aa11.58□□□□□ -0.55
CHD4-211ENST00000544484 PROCRQ9UNN8 238 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms