RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	MYDGF	Q969H8	173 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	POM121L2	Q96KW2	1035 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	C4orf45	Q96LM5	186 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF75A	Q96N20	296 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	AMELY	Q99218	206 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	PLCXD1	Q9NUJ7	323 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	MRPS18A	Q9NVS2	196 aa	Known RBP	8.81	□□□□□ -1
CPSF7-221	ENST00000543545	SLCO1C1	Q9NYB5	712 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	UBAP1	Q9NZ09	502 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	PSORS1C1	Q9UIG5	152 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	BLOC1S6	Q9UL45	172 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	MYRF	Q9Y2G1	1151 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	RNF115	Q9Y4L5	304 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	LRRC42	Q9Y546	428 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	PCDHGB5	Q9Y5G0	923 aa		8.81	□□□□□ -1
CPSF7-221	ENST00000543545	UBR5	O95071	2799 aa	Predicted RBP	8.81	□□□□□ -1
CPSF7-221	ENST00000543545	LRRK2	Q5S007	2527 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	HELZ2	Q9BYK8	2649 aa	Known RBP	8.8	□□□□□ -1
CPSF7-221	ENST00000543545	LOC100509620	A0A075B734	347 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	IGHV2OR16-5	A0A0B4J2B6	119 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	VSTM5	A8MXK1	200 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	ATP6V1G2-DDX39B	F2Z307	99 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	MAGEB4	O15481	346 aa	Predicted RBP	8.8	□□□□□ -1
CPSF7-221	ENST00000543545	ABHD16A	O95870	558 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	LCAT	P04180	440 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	CCDC159	P0C7I6	412 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	FAM157B	P0CG42	384 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	CALCR	P30988	508 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	OPRL1	P41146	370 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	RIDA	P52758	137 aa	Known RBP	8.8	□□□□□ -1
CPSF7-221	ENST00000543545	EGR3	Q06889	387 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	SPOCK1	Q08629	439 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	RBM48	Q5RL73	367 aa	Known RBP	8.8	□□□□□ -1
CPSF7-221	ENST00000543545	SEZ6L2	Q6UXD5	910 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	UNQ6126/PRO20091	Q6UXV3	157 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	PLEKHG7	Q6ZR37	379 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	SSX6	Q7RTT6	188 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	FAM220A	Q7Z4H9	259 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF679	Q8IYX0	411 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	YIPF7	Q8N8F6	280 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	ACBD4	Q8NC06	268 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	OR10S1	Q8NGN2	331 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	OR8B4	Q96RC9	309 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	KCNJ15	Q99712	375 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	RHNO1	Q9BSD3	238 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	CCDC90B	Q9GZT6	254 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	BRD7	Q9NPI1	651 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	PNRC2	Q9NPJ4	139 aa	Known RBP	8.8	□□□□□ -1
CPSF7-221	ENST00000543545	INPP5E	Q9NRR6	644 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	CNOT2	Q9NZN8	540 aa	Known RBP	8.8	□□□□□ -1
CPSF7-221	ENST00000543545	GNG8	Q9UK08	70 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	GTF2A1L	Q9UNN4	478 aa		8.8	□□□□□ -1
CPSF7-221	ENST00000543545	DIMT1	Q9UNQ2	313 aa	Known RBP	8.8	□□□□□ -1
CPSF7-221	ENST00000543545	FLNC	Q14315	2725 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	METTL15	A6NJ78	407 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545		J3QLW9	94 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545		M0R135	149 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	SIAH2	O43255	324 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF254	O75437	659 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	RPP14	O95059	124 aa	Known RBP	8.79	□□□□□ -1
CPSF7-221	ENST00000543545	APOC1	P02654	83 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	LCK	P06239	509 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	ANXA2	P07355	339 aa	Known RBP	8.79	□□□□□ -1
CPSF7-221	ENST00000543545	TACSTD2	P09758	323 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	SLC2A1	P11166	492 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	PIP	P12273	146 aa	Predicted RBP	8.79	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF35	P13682	527 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF19	P17023	458 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	RAD52	P43351	418 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	CX3CR1	P49238	355 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF85	Q03923	595 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	TLE4	Q04727	773 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	HGFAC	Q04756	655 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	SNTB2	Q13425	540 aa	Known RBP	8.79	□□□□□ -1
CPSF7-221	ENST00000543545	TP53I3	Q53FA7	332 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	HIST2H2BC	Q6DN03	193 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	DEGS2	Q6QHC5	323 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	TMPRSS11A	Q6ZMR5	421 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF704	Q6ZNC4	412 aa	Predicted RBP	8.79	□□□□□ -1
CPSF7-221	ENST00000543545	TMEM200A	Q86VY9	491 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	PAQR4	Q8N4S7	273 aa	Predicted RBP	8.79	□□□□□ -1
CPSF7-221	ENST00000543545	RFLNB	Q8N5W9	214 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	KBTBD8	Q8NFY9	601 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	ABHD4	Q8TB40	342 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	IPCEF1	Q8WWN9	437 aa	Predicted RBP	8.79	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF799	Q96GE5	643 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	HS3ST6	Q96QI5	342 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	DCLRE1C	Q96SD1	692 aa	Known RBP	8.79	□□□□□ -1
CPSF7-221	ENST00000543545	ALG8	Q9BVK2	526 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	NIPAL2	Q9H841	368 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	FGF20	Q9NP95	211 aa	Predicted RBP	8.79	□□□□□ -1
CPSF7-221	ENST00000543545	DDX28	Q9NUL7	540 aa	Known RBP	8.79	□□□□□ -1
CPSF7-221	ENST00000543545	ERVK13-1	Q9NX77	482 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	ERVK-18	Q9QC07	812 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	ATPIF1	Q9UII2	106 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	EXOSC1	Q9Y3B2	195 aa	Known RBP	8.79	□□□□□ -1
CPSF7-221	ENST00000543545	LRP12	Q9Y561	859 aa		8.79	□□□□□ -1
CPSF7-221	ENST00000543545	TMEM269	A0A1B0GVZ9	245 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	PRR32	B1ATL7	298 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545		J3QRE1	110 aa		8.78	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms