RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 RAP1BP61224 184 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 RAP1AP62834 184 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 ADAM8P78325 824 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 GLO1Q04760 184 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 ZP2Q05996 745 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 GK2Q14410 553 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 NR0B2Q15466 257 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 MS4A18Q3C1V0 323 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 C14orf28Q4W4Y0 310 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 GLYATL3Q5SZD4 288 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 PHF19Q5T6S3 580 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 ATPAF1Q5TC12 328 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 OTPQ5XKR4 325 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 HLA-DQA1Q5Y7H0 255 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF660Q6AZW8 331 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 DEGS2Q6QHC5 323 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 TMEM205Q6UW68 189 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 GSG1LQ6UXU4 331 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 MDGA2Q7Z553 956 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 HSD17B13Q7Z5P4 300 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 GALNT16Q8N428 558 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 C12orf45Q8N5I9 185 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 GALNT11Q8NCW6 608 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 OR5M9Q8NGP3 310 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 OR13C8Q8NGS7 320 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 OR1L3Q8NH93 324 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 ST7LQ8TDW4 575 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 RNF138Q8WVD3 245 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 ASB10Q8WXI3 467 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 AQP3Q92482 292 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 DAZLQ92904 295 aaKnown RBP4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 DVL3Q92997 716 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 SLC25A36Q96CQ1 311 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 CXorf58Q96LI9 332 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 LINC00052Q96N35 136 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 FOXN4Q96NZ1 517 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 DMRTA2Q96SC8 542 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 DPYSL5Q9BPU6 564 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 POTEKPQ9BYX7 375 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 TBL1XR1Q9BZK7 514 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 PPA2Q9H2U2 334 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 POFUT1Q9H488 388 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 EXO5Q9H790 373 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 FANCFQ9NPI8 374 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 SLC2A4RGQ9NR83 387 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 MED11Q9P086 117 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 KLHL13Q9P2N7 655 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 CKLFQ9UBR5 152 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 HHLA2Q9UM44 414 aa4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 COA3Q9Y2R0 106 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 TDRD6O60522 2096 aaKnown RBP4.64□□□□□ -1.67
ATPAF1-212ENST00000542495 FXYD6-FXYD2A0A087WZ82 144 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 LOC107986453A0A1B0GWG9 222 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 MEIS3P1A6NDR6 274 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 C2CD4DB7Z1M9 353 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 TRIM77I1YAP6 450 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 LINC01387J3KSC0 135 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 TM4SF5O14894 197 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 GMFGO60234 142 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 RAD1O60671 282 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF217O75362 1048 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 MPZL1O95297 269 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 AHSA1O95433 338 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 HPP00738 406 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 UBCP0CG48 685 aaKnown RBP4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 SLC25A4P12235 298 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 FBLP22087 321 aaKnown RBP4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 CD38P28907 300 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 NUP62P37198 522 aaPredicted RBP4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 UBE2MP61081 183 aaKnown RBP4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 HSD11B2P80365 405 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 QRFPP83859 136 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 OC90Q02509 493 aaPredicted RBP4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 CFHR1Q03591 330 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 PMPCAQ10713 525 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 NSDHLQ15738 373 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 SMAD2Q15796 467 aaKnown RBP4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 MOGAT2Q3SYC2 334 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF260Q3ZCT1 412 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 C4orf46Q504U0 113 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 VWA2Q5GFL6 755 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 CLVS2Q5SYC1 327 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 TMEM244Q5VVB8 128 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 LPCAT3Q6P1A2 487 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF529Q6P280 563 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 POMZP3Q6PJE2 187 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 ALKAL2Q6UX46 152 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 TFAP2EQ6VUC0 442 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF813Q6ZN06 617 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF704Q6ZNC4 412 aaPredicted RBP4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 SLC29A4Q7RTT9 530 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 MISPQ8IVT2 679 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 WDFY1Q8IWB7 410 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 D2HGDHQ8N465 521 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 IL22RA1Q8N6P7 574 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 NKAIN3Q8N8D7 197 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 BVESQ8NE79 360 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 PLPP5Q8NEB5 264 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 OR51A2Q8NGJ7 313 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 OR5M8Q8NGP6 311 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms