RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CDH26Q8IXH8 852 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 RELL2Q8NC24 303 aaPredicted RBP13.2□□□□□ -0.3
DDX55-209ENST00000542286 DNASE2BQ8WZ79 361 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 CCNL2Q96S94 520 aaPredicted RBP13.2□□□□□ -0.3
DDX55-209ENST00000542286 WDR77Q9BQA1 342 aaPredicted RBP13.2□□□□□ -0.3
DDX55-209ENST00000542286 ZNF768Q9H5H4 540 aaKnown RBP13.2□□□□□ -0.3
DDX55-209ENST00000542286 ARID1AO14497 2285 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 A0A1W2PQD3 144 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 ZNF814B7Z6K7 855 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 PYCARD-AS1I3L0S3 204 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 P2RY10O00398 339 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 CTDSPLO15194 276 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 CTAG2O75638 210 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 SPDEFO95238 335 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 CDAP32320 146 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 SLC26A5P58743 744 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 MFAP5Q13361 173 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 RSPO4Q2I0M5 234 aaPredicted RBP13.2□□□□□ -0.3
DDX55-209ENST00000542286 C2orf68Q2NKX9 166 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 ZNF227Q86WZ6 799 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 NFAM1Q8NET5 270 aaPredicted RBP13.2□□□□□ -0.3
DDX55-209ENST00000542286 SOX7Q9BT81 388 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 ESRP2Q9H6T0 727 aaKnown RBP13.2□□□□□ -0.3
DDX55-209ENST00000542286 STEAP1Q9UHE8 339 aa13.2□□□□□ -0.3
DDX55-209ENST00000542286 MRPS18BQ9Y676 258 aaKnown RBP13.2□□□□□ -0.3
DDX55-209ENST00000542286 LOC400499M0QZD8 3231 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 LY6G6EA0A0G2JKS1 128 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 GLSO94925 669 aaPredicted RBP13.19□□□□□ -0.3
DDX55-209ENST00000542286 IGF2P01344 180 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 SLC2A1P11166 492 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 STARD6P59095 220 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 MC2RQ01718 297 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 TLE3Q04726 772 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 CSRP2Q16527 193 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 MOGAT2Q3SYC2 334 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 GLYATL3Q5SZD4 288 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 RHBDD2Q6NTF9 364 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 OR1J4Q8NGS1 313 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 ASB5Q8WWX0 329 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 MFRPQ9BY79 579 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 ATG5Q9H1Y0 275 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 COA4Q9NYJ1 87 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 U3KQA8 63 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 ANKRD20A5PA0PJZ0 165 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 HMSDA8MTL9 139 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 PATE3B3GLJ2 98 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 NPIPA5E9PKD4 350 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 MAPK3P27361 379 aaPredicted RBP13.19□□□□□ -0.3
DDX55-209ENST00000542286 SFTPDP35247 375 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 BIDP55957 195 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 ZNF626Q68DY1 528 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 BAIAP2L2Q6UXY1 529 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 OR4C16Q8NGL9 310 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 RNF128Q8TEB7 428 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 FAM3DQ96BQ1 224 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 SPACA5Q96QH8 159 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 CHST6Q9GZX3 395 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 DNTTIP1Q9H147 329 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 CHRDQ9H2X0 955 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 SLC39A1Q9NY26 324 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 NPIPA1Q9UND3 350 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 DHDHQ9UQ10 334 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 RPH3AQ9Y2J0 694 aaPredicted RBP13.19□□□□□ -0.3
DDX55-209ENST00000542286 TMEM14AQ9Y6G1 99 aa13.19□□□□□ -0.3
DDX55-209ENST00000542286 IGHV5-10-1A0A0J9YXX1 117 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 TMEM272A0A1B0GTI8 110 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 MT-ATP6P00846 226 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 RLN2P04090 185 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 RLN1P04808 185 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 CSN2P05814 226 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 ELFN2Q5R3F8 820 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 PHF19Q5T6S3 580 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 TMEM225Q6GV28 225 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 ZNF627Q7L945 461 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 JAGN1Q8N5M9 183 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 PLPP5Q8NEB5 264 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 PXT1Q8NFP0 134 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 PHYHIPQ92561 330 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 FAM46BQ96A09 425 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 SLC25A44Q96H78 314 aaPredicted RBP13.18□□□□□ -0.3
DDX55-209ENST00000542286 GPN1Q9HCN4 374 aaPredicted RBP13.18□□□□□ -0.3
DDX55-209ENST00000542286 VSIG10L2P0DP72 767 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 CALCBP10092 127 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 ZNF28P17035 718 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 RIDAP52758 137 aaKnown RBP13.18□□□□□ -0.3
DDX55-209ENST00000542286 EMP2P54851 167 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 GLO1Q04760 184 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 RASGEF1BQ0VAM2 473 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 TMEM71Q6P5X7 295 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 WDR74Q6RFH5 385 aaPredicted RBP13.18□□□□□ -0.3
DDX55-209ENST00000542286 EID2Q8N6I1 236 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 SLC39A7Q92504 469 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 HLA-CQ95604 372 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 PNPLA2Q96AD5 504 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 CMBLQ96DG6 245 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 CCDC74BQ96LY2 380 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 GINS4Q9BRT9 223 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 VSX1Q9NZR4 365 aaPredicted RBP13.18□□□□□ -0.3
DDX55-209ENST00000542286 OPN4Q9UHM6 478 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 CYB5R1Q9UHQ9 305 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms