RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CDC20Q12834 499 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 RNFT1Q5M7Z0 435 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 COMMD2Q86X83 199 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 SYNPRQ8TBG9 265 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 OR51E1Q8TCB6 317 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 KCTD12Q96CX2 325 aaKnown RBP12.47□□□□□ -0.41
ACTN1-205ENST00000538545 CYYR1Q96J86 154 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 FAM173AQ9BQD7 235 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■■□□□ 14.2
ACTN1-205ENST00000538545 CRLF2Q9HC73 371 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 PNRC2Q9NPJ4 139 aaKnown RBP12.47□□□□□ -0.41
ACTN1-205ENST00000538545 ZNF716A6NP11 495 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 F5H5K5 113 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 EIF1BO60739 113 aaKnown RBP12.47□□□□□ -0.41
ACTN1-205ENST00000538545 HRGP04196 525 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 HSD11B1P28845 292 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 NOVA1P51513 510 aaKnown RBP12.47□□□□□ -0.41
ACTN1-205ENST00000538545 TAF13Q15543 124 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 FGGYQ96C11 551 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 NAA11Q9BSU3 229 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-205ENST00000538545 ULBP2Q9BZM5 246 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 PBOV1Q9GZY1 135 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 ADAM30Q9UKF2 790 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 BOKQ9UMX3 212 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-205ENST00000538545 A0A0B4J293 547 aa12.46□□□□□ -0.41
ACTN1-205ENST00000538545 KDM4BO94953 1096 aa12.46□□□□□ -0.41
ACTN1-205ENST00000538545 INPP1P49441 399 aa12.46□□□□□ -0.41
ACTN1-205ENST00000538545 MEOX1P50221 254 aa12.46□□□□□ -0.41
ACTN1-205ENST00000538545 AGFG1P52594 562 aaKnown RBP12.46□□□□□ -0.41
ACTN1-205ENST00000538545 TPTEP56180 551 aa12.46□□□□□ -0.41
ACTN1-205ENST00000538545 ZNF121P58317 390 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-205ENST00000538545 ZNF239Q16600 458 aaKnown RBP12.46□□□□□ -0.41
ACTN1-205ENST00000538545 BCL2L15Q5TBC7 163 aa12.46□□□□□ -0.41
ACTN1-205ENST00000538545 FDX2Q6P4F2 183 aa12.46□□□□□ -0.41
ACTN1-205ENST00000538545 LUZP2Q86TE4 346 aa12.46□□□□□ -0.41
ACTN1-205ENST00000538545 OR2V1Q8NHB1 315 aa12.46□□□□□ -0.41
ACTN1-205ENST00000538545 ADAT3Q96EY9 351 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-205ENST00000538545 SLITRK2Q9H156 845 aa12.46□□□□□ -0.41
ACTN1-205ENST00000538545 TM4SF5O14894 197 aa12.46□□□□□ -0.42
ACTN1-205ENST00000538545 B4GALT1P15291 398 aa12.46□□□□□ -0.42
ACTN1-205ENST00000538545 ABOP16442 354 aa12.46□□□□□ -0.42
ACTN1-205ENST00000538545 MAPK3P27361 379 aaPredicted RBP12.46□□□□□ -0.42
ACTN1-205ENST00000538545 CCR9P51686 369 aa12.46□□□□□ -0.42
ACTN1-205ENST00000538545 FOXG1P55316 489 aaPredicted RBP12.46□□□□□ -0.42
ACTN1-205ENST00000538545 FAM57BQ71RH2 274 aa12.46□□□□□ -0.42
ACTN1-205ENST00000538545 MINDY2Q8NBR6 621 aa12.46□□□□□ -0.42
ACTN1-205ENST00000538545 FNDC9Q8TBE3 224 aa12.46□□□□□ -0.42
ACTN1-205ENST00000538545 TRIM63Q969Q1 353 aa12.46□□□□□ -0.42
ACTN1-205ENST00000538545 NABP1Q96AH0 204 aa12.46□□□□□ -0.42
ACTN1-205ENST00000538545 KIAA1143Q96AT1 154 aaPredicted RBP12.46□□□□□ -0.42
ACTN1-205ENST00000538545 FAM71F1Q96KD3 344 aaPredicted RBP12.46□□□□□ -0.42
ACTN1-205ENST00000538545 ABRACLQ9P1F3 81 aa12.46□□□□□ -0.42
ACTN1-205ENST00000538545 DHHO43323 396 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 TLX3O43711 291 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-205ENST00000538545 GNALP38405 381 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 ASAH1Q13510 395 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 ENDOGQ14249 297 aaKnown RBP12.45□□□□□ -0.42
ACTN1-205ENST00000538545 KLHL24Q6TFL4 600 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 FDCSPQ8NFU4 85 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 FBXO17Q96EF6 278 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 FER1L6-AS2Q96M78 137 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 KCNJ15Q99712 375 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 COL25A1Q9BXS0 654 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-205ENST00000538545 FOXD3Q9UJU5 478 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-205ENST00000538545 HHLA2Q9UM44 414 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 MED12LQ86YW9 2145 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 LOC102725191A0A1B0GVB3 256 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 PDCD5O14737 125 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 LYRM1O43325 122 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 SP1P08047 785 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 DDOSTP39656 456 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 LHX2P50458 406 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 NKX2-5P52952 324 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-205ENST00000538545 ARG2P78540 354 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 FAAP20Q6NZ36 180 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 FGFBP3Q8TAT2 258 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 BEX2Q9BXY8 128 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 ZNF552Q9H707 407 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-205ENST00000538545 KLK11Q9UBX7 282 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 SPTBN4Q9H254 2564 aa12.45□□□□□ -0.42
ACTN1-205ENST00000538545 MEIOCA2RUB1 952 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 MEIS3P1A6NDR6 274 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 ZNF878C9JN71 531 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 CDK2P24941 298 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 FKBP2P26885 142 aaKnown RBP12.44□□□□□ -0.42
ACTN1-205ENST00000538545 SLC6A9P48067 706 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 GLYATL3Q5SZD4 288 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 SFRP5Q5T4F7 317 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 JMJD6Q6NYC1 403 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-205ENST00000538545 AAED1Q7RTV5 226 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 ABHD12BQ7Z5M8 362 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-205ENST00000538545 JAGN1Q8N5M9 183 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 ZNF283Q8N7M2 679 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 OR8B12Q8NGG6 310 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 TMEM54Q969K7 222 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 RFT1Q96AA3 541 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 OR2B2Q9GZK3 357 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 SPINK2P20155 84 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 MAP2K3P46734 347 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 CX3CR1P49238 355 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms