RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 VSIG4Q9Y279 399 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 STRAPQ9Y3F4 350 aaKnown RBP7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 RCBTB2O95199 551 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 ZNF735P0CB33 412 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 SELEP16581 610 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 TEAD1P28347 426 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 ADCYAP1R1P41586 468 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 RAB7AP51149 207 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 TMEM241Q24JQ0 296 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 C1orf185Q5T7R7 199 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 VHLLQ6RSH7 139 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 MRPL41Q8IXM3 137 aaKnown RBP7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 C9orf40Q8IXQ3 194 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 ZNF100Q8IYN0 542 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 KDM8Q8N371 416 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 AGBL5Q8NDL9 886 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 TVP23CQ96ET8 276 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 NUDT11Q96G61 164 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 NKX3-1Q99801 234 aaPredicted RBP7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 ALKBH7Q9BT30 221 aaPredicted RBP7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 TRIM2Q9C040 744 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 TMEM39BQ9GZU3 492 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 KLHL28Q9NXS3 571 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 TAAR2Q9P1P5 351 aa7.7□□□□□ -1.18
SRGAP1-202ENST00000537556 TRBV5-4A0A0C4DH59 114 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 A6NJY4 79 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 MASP2O00187 686 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 BHLHE40O14503 412 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 SCGB1D1O95968 90 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 CYB5R3P00387 301 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 UMODP07911 640 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 ERCC1P07992 297 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 MMP3P08254 477 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 DANCRP0C864 163 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 SLC2A5P22732 501 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 OR10J1P30954 320 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 RPL4P36578 427 aaKnown RBP7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 ARRB1P49407 418 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 TAS2R31P59538 309 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 RANP62826 216 aaKnown RBP7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 SLC35A1P78382 337 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 C1orf189Q5VU69 101 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 FKBP1CQ5VVH2 108 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 LEG1Q6P5S2 330 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 PSRC1Q6PGN9 363 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 CHST13Q8NET6 341 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 OR14L1PQ8NHC6 308 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 ORAOV1Q8WV07 137 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 ZNF775Q96BV0 537 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 FAM83CQ9BQN1 747 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 NIPSNAP3BQ9BS92 247 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 ANGPTL4Q9BY76 406 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 CSTL1Q9H114 145 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 MAGEH1Q9H213 219 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 OR5AC2Q9NZP5 309 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 CYP8B1Q9UNU6 501 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 DOCK4Q8N1I0 1966 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 MCM3APO60318 1980 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 EPPINO95925 133 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 IGSF6O95976 241 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 HPRT1P00492 218 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 SLC35G6P0C7Q6 338 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 SEC11BP0C7V7 166 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 EDNRBP24530 442 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 CHRNB4P30926 498 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 TSFMP43897 325 aaKnown RBP7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 TNFSF10P50591 281 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 NOVA1P51513 510 aaKnown RBP7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 Q499Y3 187 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 EXOSC6Q5RKV6 272 aaKnown RBP7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 MED25Q71SY5 747 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 OR2D3Q8NGH3 330 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 OR51F2Q8NH61 342 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 ZNF563Q8TA94 476 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 SUSD6Q92537 303 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 ANKRD9Q96BM1 317 aaPredicted RBP7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 ACY3Q96HD9 319 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 SLC35G5Q96KT7 338 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 MIEN1Q9BRT3 115 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 PCGF1Q9BSM1 259 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 TTTY10Q9BZA0 68 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 Q9N2J8 555 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 RAB18Q9NP72 206 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 COLEC10Q9Y6Z7 277 aa7.69□□□□□ -1.18
SRGAP1-202ENST00000537556 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 TSPAN11A1L157 253 aa7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 FTCDNL1E5RQL4 147 aa7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 PEX12O00623 359 aa7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 ERAL1O75616 437 aaKnown RBP7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 MBPP02686 304 aaPredicted RBP7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 PRH1P02810 166 aa7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 KLK1P06870 262 aa7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 ZGLP1P0C6A0 271 aa7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 AKR1C4P17516 323 aa7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 BATFQ16520 125 aa7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 UPP1Q16831 310 aa7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 ARL14EPQ8N8R7 260 aaPredicted RBP7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 OR56B2PQ8NGI1 322 aa7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 CXorf40AQ8TE69 158 aa7.68□□□□□ -1.18
SRGAP1-202ENST00000537556 SPACA7Q96KW9 195 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms