RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 LOC107986453A0A1B0GWG9 222 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF195O14628 629 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 PIPP12273 146 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-209ENST00000537178 EMP3P54852 163 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 RAB1AP62820 205 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 H3F3AP84243 136 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 ACOT6Q3I5F7 207 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-209ENST00000537178 PXDC1Q5TGL8 231 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 RPL7L1Q6DKI1 246 aaKnown RBP9.72□□□□□ -0.85
CLIP1-209ENST00000537178 NANOGP1Q8N7R0 232 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 LKAAEAR1Q8TD35 194 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 OPALINQ96PE5 141 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 CIB3Q96Q77 187 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-209ENST00000537178 UQCC2Q9BRT2 126 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 CITO14578 2027 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 TRIM77I1YAP6 450 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 CCSO14618 274 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 OR5G3P0C626 314 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 CD80P33681 288 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 RTL8BQ17RB0 113 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 SPANXN5Q5MJ07 72 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 TAS1R1Q7RTX1 841 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 OR1M1Q8NGA1 313 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 ARSGQ96EG1 525 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 COMMD5Q9GZQ3 224 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 ASIC5Q9NY37 505 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 CSAG2Q9Y5P2 127 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 SSC5DA1L4H1 1573 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 SH2D1BO14796 132 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 WDR1O75083 606 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 SLCO2B1O94956 709 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 BPIFB3P59826 476 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 ERHP84090 104 aaKnown RBP9.72□□□□□ -0.85
CLIP1-209ENST00000537178 MOB1BQ7L9L4 216 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 TMEM130Q8N3G9 435 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 TIMM10BQ9Y5J6 103 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 BRWD3Q6RI45 1802 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF816-ZNF321PA0A0X1KG74 233 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 G3V3Q6 166 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 HS3ST1O14792 307 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 NID1P14543 1247 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 CPEP16870 476 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 PSMB6P28072 239 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 RPS19P39019 145 aaKnown RBP9.72□□□□□ -0.85
CLIP1-209ENST00000537178 GPR12P47775 334 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 LCN15Q6UWW0 184 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 OR4F5Q8NH21 305 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 OR51F2Q8NH61 342 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 SLC25A46Q96AG3 418 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 TOX2Q96NM4 488 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 OR4F4Q96R69 305 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 P2RY12Q9H244 342 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 CLEC2DQ9UHP7 191 aa9.72□□□□□ -0.85
CLIP1-209ENST00000537178 PMS2P1A4D2B8 440 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 DBX1A6NMT0 343 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 ACOT8O14734 319 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 AKR7A3O95154 331 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 ADRB1P08588 477 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 COX5AP20674 150 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 ARRB2P32121 409 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 AGFG1P52594 562 aaKnown RBP9.71□□□□□ -0.85
CLIP1-209ENST00000537178 ASAH1Q13510 395 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 C19orf35Q6ZS72 473 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 TSEN54Q7Z6J9 526 aaKnown RBP9.71□□□□□ -0.85
CLIP1-209ENST00000537178 KLHDC1Q8N7A1 406 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 DYNC2LI1Q8TCX1 351 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 OR51I2Q9H344 312 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 C12orf49Q9H741 205 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 SH2D7A6NKC9 451 aaPredicted RBP9.71□□□□□ -0.85
CLIP1-209ENST00000537178 M0QZ24 198 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 M0R082 166 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 NME2P1O60361 137 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 PTTG1IPP53801 180 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 RACK1P63244 317 aaKnown RBP9.71□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF718Q3SXZ3 478 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 SYT14P1Q58G82 188 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 EMC4Q5J8M3 183 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 PLAC9Q5JTB6 97 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 YOD1Q5VVQ6 348 aaPredicted RBP9.71□□□□□ -0.85
CLIP1-209ENST00000537178 LSRQ86X29 649 aaPredicted RBP9.71□□□□□ -0.85
CLIP1-209ENST00000537178 TMEM123Q8N131 208 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 NXPE3Q969Y0 559 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF2Q9BSG1 426 aaPredicted RBP9.71□□□□□ -0.85
CLIP1-209ENST00000537178 IKZF5Q9H5V7 419 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 CHST11Q9NPF2 352 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 GPR173Q9NS66 373 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 HRH3Q9Y5N1 445 aa9.71□□□□□ -0.85
CLIP1-209ENST00000537178 SMLR1H3BR10 107 aa9.71□□□□□ -0.86
CLIP1-209ENST00000537178 OR7C2O60412 319 aa9.71□□□□□ -0.86
CLIP1-209ENST00000537178 GUSBP08236 651 aa9.71□□□□□ -0.86
CLIP1-209ENST00000537178 NPPBP16860 134 aa9.71□□□□□ -0.86
CLIP1-209ENST00000537178 FCGR2CP31995 323 aa9.71□□□□□ -0.86
CLIP1-209ENST00000537178 CCL11P51671 97 aa9.71□□□□□ -0.86
CLIP1-209ENST00000537178 VAMP3Q15836 100 aa9.71□□□□□ -0.86
CLIP1-209ENST00000537178 SSX7Q7RTT5 188 aa9.71□□□□□ -0.86
CLIP1-209ENST00000537178 PRSS45Q7RTY3 260 aa9.71□□□□□ -0.86
CLIP1-209ENST00000537178 BCDIN3DQ7Z5W3 292 aaKnown RBP9.71□□□□□ -0.86
CLIP1-209ENST00000537178 FAM26EQ8N5C1 309 aa9.71□□□□□ -0.86
CLIP1-209ENST00000537178 OR52I2Q8NH67 350 aa9.71□□□□□ -0.86
CLIP1-209ENST00000537178 TMED6Q8WW62 240 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms