RNA–Protein interactions for RNA: ENST00000528773.1

SUSD1-208, Transcript of sushi domain containing 1, human

TSL 4

Gene SUSD1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUSD1-208	ENST00000528773		Q6ZTK2	550 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	PTOV1	Q86YD1	416 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	MRPL41	Q8IXM3	137 aa	Known RBP	4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	C4orf33	Q8N1A6	199 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	LRRC18	Q8N456	261 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	PAPD5	Q8NDF8	572 aa	Known RBP	4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	NPEPL1	Q8NDH3	523 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	LY6G5B	Q8NDX9	201 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	NOXO1	Q8NFA2	376 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	OR2Z1	Q8NG97	314 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	OR8B3	Q8NGG8	313 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	AKR7L	Q8NHP1	331 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	NPRL2	Q8WTW4	380 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	ASB10	Q8WXI3	467 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	IFT81	Q8WYA0	676 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	SGCD	Q92629	289 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	AJUBA	Q96IF1	538 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	C4orf45	Q96LM5	186 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	OR8B2	Q96RD0	313 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	PCGF1	Q9BSM1	259 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	C20orf27	Q9GZN8	174 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	MMP28	Q9H239	520 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	TPT1P8	Q9HAU6	139 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	SLCO1B3	Q9NPD5	702 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	C20orf141	Q9NUB4	165 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	AIG1	Q9NVV5	245 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	THUMPD1	Q9NXG2	353 aa	Known RBP	4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	SLC17A7	Q9P2U7	560 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	EIF3K	Q9UBQ5	218 aa	Known RBP	4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	CLN8	Q9UBY8	286 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	FOXJ3	Q9UPW0	622 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	SIGLEC9	Q9Y336	463 aa		4.08	□□□□□ -1.76
SUSD1-208	ENST00000528773	VPS13D	Q5THJ4	4388 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	C11orf98	E9PRG8	122 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	C3orf84	H3BNL1	204 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	ITM2A	O43736	263 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	TIMM8A	O60220	97 aa	Predicted RBP	4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	TRMU	O75648	421 aa	Known RBP	4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	SLC2A10	O95528	541 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	MPIG6B	O95866	241 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	IGF2	P01344	180 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	IGHG1	P01857	330 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	SCG5	P05408	212 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	BPGM	P07738	259 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	CST2	P09228	141 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	CCNO	P22674	350 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	TNFSF4	P23510	183 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	GABRA5	P31644	462 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	ZNF84	P51523	738 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	UGT2B15	P54855	530 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	NANOS3	P60323	173 aa	Known RBP	4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	HSF2	Q03933	536 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	EMX1	Q04741	257 aa	Predicted RBP	4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	ENDOG	Q14249	297 aa	Known RBP	4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	MELK	Q14680	651 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	RGN	Q15493	299 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	NPTX1	Q15818	432 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	GTDC1	Q4AE62	458 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	TTMP	Q5BVD1	217 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	CD276	Q5ZPR3	534 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	ZNF613	Q6PF04	617 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	FBXW12	Q6X9E4	464 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	NLRC3	Q7RTR2	1065 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	IGFN1	Q86VF2	1251 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	CALHM3	Q86XJ0	350 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773		Q8N2B8	174 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	C10orf111	Q8N326	155 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	CELF2-AS1	Q8N7Q2	184 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	ZNF781	Q8N8C0	355 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	CCDC63	Q8NA47	563 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	HIPK4	Q8NE63	616 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	OR5R1	Q8NH85	324 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	BBS10	Q8TAM1	723 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	LRRC8C	Q8TDW0	803 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	LIPH	Q8WWY8	451 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	TNFRSF14	Q92956	283 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	PTP4A1	Q93096	173 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	MAL2	Q969L2	176 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	CMBL	Q96DG6	245 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	APOPT1	Q96IL0	206 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	MAGEB18	Q96M61	343 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	OR52E6	Q96RD3	313 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	SORT1	Q99523	831 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	SEMA6A	Q9H2E6	1030 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	TOR3A	Q9H497	397 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	RANBP3	Q9H6Z4	567 aa	Predicted RBP	4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	PPCS	Q9HAB8	311 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	ELOVL3	Q9HB03	270 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	SMURF1	Q9HCE7	757 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	MEPE	Q9NQ76	525 aa	Predicted RBP	4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	SERTAD4	Q9NUC0	356 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	RPS6KB2	Q9UBS0	482 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	ZNF229	Q9UJW7	825 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	STARD10	Q9Y365	291 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	TIMM10B	Q9Y5J6	103 aa		4.07	□□□□□ -1.76
SUSD1-208	ENST00000528773	OR6C6	A6NF89	314 aa		4.06	□□□□□ -1.76
SUSD1-208	ENST00000528773	RFXANK	O14593	260 aa		4.06	□□□□□ -1.76
SUSD1-208	ENST00000528773	CHP2	O43745	196 aa		4.06	□□□□□ -1.76
SUSD1-208	ENST00000528773	TYROBP	O43914	113 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms