RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ASB5Q8WWX0 329 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 WNT2BQ93097 391 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 ZNF524Q96C55 264 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 ADOQ96SZ5 270 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 SCPEP1Q9HB40 452 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 BARX1Q9HBU1 254 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-208ENST00000527323 PNO1Q9NRX1 252 aaKnown RBP11.23□□□□□ -0.61
CAPN1-208ENST00000527323 PRODH2Q9UF12 536 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 FRYQ5TBA9 3013 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 SPTY2D1-AS1A0A0U1RR47 76 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 FADS1O60427 444 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 ATG12O94817 140 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 UTS2O95399 124 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 AKR1C4P17516 323 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 STARD6P59095 220 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 MFGE8Q08431 387 aaPredicted RBP11.22□□□□□ -0.61
CAPN1-208ENST00000527323 SKP2Q13309 424 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.22□□□□□ -0.61
CAPN1-208ENST00000527323 LPCAT3Q6P1A2 487 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 GTPBP8Q8N3Z3 284 aaPredicted RBP11.22□□□□□ -0.61
CAPN1-208ENST00000527323 OR13C3Q8NGS6 347 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 RNF128Q8TEB7 428 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 PAQR8Q8TEZ7 354 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 LIPHQ8WWY8 451 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 ASB17Q8WXJ9 295 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 CCNL2Q96S94 520 aaPredicted RBP11.22□□□□□ -0.61
CAPN1-208ENST00000527323 SLCO5A1Q9H2Y9 848 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 ADAMTS9Q9P2N4 1935 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 COL4A2P08572 1712 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 ABCD4O14678 606 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 CFIP05156 583 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 HOXC4P09017 264 aaPredicted RBP11.22□□□□□ -0.61
CAPN1-208ENST00000527323 CD38P28907 300 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 PPP1R1AQ13522 171 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 ELOCQ15369 112 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 ASPHD2Q6ICH7 369 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 TCEAL6Q6IPX3 200 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 MARCH3Q86UD3 253 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 OR13C8Q8NGS7 320 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 TCEAL3Q969E4 200 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 VSIG4Q9Y279 399 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 A0A1B0GTI1 187 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 RNF222A6NCQ9 220 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 TMEM200CA6NKL6 621 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 C17orf105B2RV13 164 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 BPNT1O95861 308 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 TNFP01375 233 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 MELTFP08582 738 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 ZNF735P0CB33 412 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 SLC25A4P12235 298 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 ADGRE4PQ86SQ3 457 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 SVBPQ8N300 66 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 SHDQ96IW2 340 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 GAL3ST4Q96RP7 486 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 PHB2Q99623 299 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 ADAT1Q9BUB4 502 aaKnown RBP11.22□□□□□ -0.61
CAPN1-208ENST00000527323 OR8D2Q9GZM6 311 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 CST11Q9H112 138 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 MBD2Q9UBB5 411 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 KLK13Q9UKR3 277 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 EML5Q05BV3 1969 aa11.22□□□□□ -0.61
CAPN1-208ENST00000527323 TMEM218A2RU14 115 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 HSPB2A8KAH6 182 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 F8W036 122 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 K7ESF4 209 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 CASRP41180 1078 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 BLOC1S1P78537 153 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 ZNF345Q14585 488 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 OR7A5Q15622 319 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 HSPB2Q16082 182 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 ACKR1Q16570 336 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 FAM166AQ6J272 317 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 LYG2Q86SG7 212 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 PRRT1Q99946 306 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 TMED7Q9Y3B3 224 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 EMC9Q9Y3B6 208 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 ZFHX4Q86UP3 3567 aa11.21□□□□□ -0.61
CAPN1-208ENST00000527323 METTL21EPA6NDL7 271 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 METTL12A8MUP2 240 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 TNFRSF10CO14798 259 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF208O43345 1280 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 IFNA6P05013 189 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 PVALBP20472 110 aaPredicted RBP11.21□□□□□ -0.62
CAPN1-208ENST00000527323 HHEXQ03014 270 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 FUT7Q11130 342 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 OR52W1Q6IF63 320 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 TRAPPC6BQ86SZ2 158 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 PUSL1Q8N0Z8 303 aaKnown RBP11.21□□□□□ -0.62
CAPN1-208ENST00000527323 SPEM1Q8N4L4 309 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 GVQW1Q8N7I0 195 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF615Q8N8J6 731 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 FAM46BQ96A09 425 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 CMBLQ96DG6 245 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 PHYHIPLQ96FC7 376 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 ABHD6Q9BV23 337 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 NXF5Q9H1B4 397 aaKnown RBP11.21□□□□□ -0.62
CAPN1-208ENST00000527323 SEMA6CQ9H3T2 930 aa11.21□□□□□ -0.62
CAPN1-208ENST00000527323 ZNF768Q9H5H4 540 aaKnown RBP11.21□□□□□ -0.62
CAPN1-208ENST00000527323 PRSS37A4D1T9 235 aa11.2□□□□□ -0.62
CAPN1-208ENST00000527323 CDC14CA4D256 554 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms