RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 PLGRKTQ9HBL7 147 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 ZNF337Q9Y3M9 751 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 TDRD15B5MCY1 1934 aaKnown RBP3.26□□□□□ -1.89
SKP1-209ENST00000522552 MTCL1Q9Y4B5 1905 aaKnown RBP3.26□□□□□ -1.89
SKP1-209ENST00000522552 RAB3GAP2Q9H2M9 1393 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.26□□□□□ -1.89
SKP1-209ENST00000522552 LY6G6EA0A0G2JKS1 128 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 KIR2DL5BA0A0G2JN68 375 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 KIR2DL5BA0A0G2JPC4 375 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 OR2AT4A6NND4 320 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 C15orf61A6NNL5 157 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 NCBP2LA6PVI3 153 aaKnown RBP3.26□□□□□ -1.89
SKP1-209ENST00000522552 F5H5T6 163 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 H3BNH8 94 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 NUPL2O15504 423 aaKnown RBP3.26□□□□□ -1.89
SKP1-209ENST00000522552 PHF1O43189 567 aaPredicted RBP3.26□□□□□ -1.89
SKP1-209ENST00000522552 MGRN1O60291 552 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 SLC16A7O60669 478 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 MAGEC1O60732 1142 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 SLC2A10O95528 541 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 CDK1P06493 297 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 DAOP14920 347 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 CFL1P23528 166 aaKnown RBP3.26□□□□□ -1.89
SKP1-209ENST00000522552 GPX4P36969 197 aaPredicted RBP3.26□□□□□ -1.89
SKP1-209ENST00000522552 ALDH3B2P48448 385 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 FABP6P51161 128 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 RAP1GDS1P52306 607 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 STC1P52823 247 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 LMO4P61968 165 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 AESQ08117 197 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 SLC10A7Q0GE19 358 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 PDIA2Q13087 525 aaKnown RBP3.26□□□□□ -1.89
SKP1-209ENST00000522552 TRAM1Q15629 374 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 SLC1A5Q15758 541 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 ACSM3Q53FZ2 586 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 AKIRIN2Q53H80 203 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 FAM45BPQ6NSW5 357 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 PWWP2BQ6NUJ5 590 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 DNM1P34Q6PK57 102 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 CASP12Q6UXS9 341 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 ACOT7LQ6ZUV0 252 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 SH2D5Q6ZV89 423 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 MBOAT2Q6ZWT7 520 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 PRSS41Q7RTY9 318 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 ITPRIPQ8IWB1 547 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 KIR2DL5AQ8N109 375 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 STPG2Q8N412 459 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 OR10G7Q8NGN6 311 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 KIR2DL5BQ8NHK3 375 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 C22orf15Q8WYQ4 148 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 HBEGFQ99075 208 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 WACQ9BTA9 647 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 MRPS26Q9BYN8 205 aaKnown RBP3.26□□□□□ -1.89
SKP1-209ENST00000522552 MFSD1Q9H3U5 465 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 DHX35Q9H5Z1 703 aaKnown RBP3.26□□□□□ -1.89
SKP1-209ENST00000522552 SPRR3Q9UBC9 169 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 OPN4Q9UHM6 478 aa3.26□□□□□ -1.89
SKP1-209ENST00000522552 STK36Q9NRP7 1315 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 MYH15Q9Y2K3 1946 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 IGHV3OR16-12A0A075B7B8 117 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 SAA2-SAA4A0A096LPE2 208 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 IGHV3-38A0A0C4DH36 116 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 ZNF487B1APH4 448 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 ERVV-1B6SEH8 477 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 ERVV-2B6SEH9 535 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 BIRC5O15392 142 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 DPM1O60762 260 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 CD8AP01732 235 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 IGHG1P01857 330 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 APOEP02649 317 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 CD74P04233 296 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 CALB1P05937 261 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 SNRPCP09234 159 aaKnown RBP3.25□□□□□ -1.89
SKP1-209ENST00000522552 PSG1P11464 419 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 UGT2B7P16662 529 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 TCP1P17987 556 aaKnown RBP3.25□□□□□ -1.89
SKP1-209ENST00000522552 RAB5AP20339 215 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 PVALBP20472 110 aaPredicted RBP3.25□□□□□ -1.89
SKP1-209ENST00000522552 USF1P22415 310 aaPredicted RBP3.25□□□□□ -1.89
SKP1-209ENST00000522552 PROZP22891 400 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 SHC1P29353 583 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 ARL2P36404 184 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 RPL29P47914 159 aaKnown RBP3.25□□□□□ -1.89
SKP1-209ENST00000522552 RORCP51449 518 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 SEMG2Q02383 582 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 ZNF92Q03936 586 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 CD164Q04900 197 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 BCL2L1Q07817 233 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 OR7A5Q15622 319 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 POU2AF1Q16633 256 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 GUK1Q16774 197 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 KIAA1644Q3SXP7 199 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 OGFRL1Q5TC84 451 aaPredicted RBP3.25□□□□□ -1.89
SKP1-209ENST00000522552 OLFML2AQ68BL7 652 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 Q6ZN92 141 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 TRPT1Q86TN4 253 aaKnown RBP3.25□□□□□ -1.89
SKP1-209ENST00000522552 GID4Q8IVV7 300 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 SYNPRQ8TBG9 265 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 SECTM1Q8WVN6 248 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 TMEM234Q8WY98 164 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms