RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 PSME3P61289 254 aa16.53■□□□□ 0.24
PABPC1-215ENST00000520804 SEC61A1P61619 476 aaKnown RBP16.53■□□□□ 0.24
PABPC1-215ENST00000520804 SEC23BQ15437 767 aa16.53■□□□□ 0.24
PABPC1-215ENST00000520804 OR5AS1Q8N127 324 aa16.53■□□□□ 0.24
PABPC1-215ENST00000520804 ZMYND19Q96E35 227 aaPredicted RBP16.53■□□□□ 0.24
PABPC1-215ENST00000520804 C7orf34Q96L11 122 aa16.53■□□□□ 0.24
PABPC1-215ENST00000520804 AURKCQ9UQB9 309 aa16.53■□□□□ 0.24
PABPC1-215ENST00000520804 UNC119BA6NIH7 251 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 A8MXK9 166 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 TMEM178BH3BS89 294 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 MDH1P40925 334 aaKnown RBP16.52■□□□□ 0.24
PABPC1-215ENST00000520804 MMP16P51512 607 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 UBA52P62987 128 aaKnown RBP16.52■□□□□ 0.24
PABPC1-215ENST00000520804 ZNF154Q13106 437 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 HLXQ14774 488 aaPredicted RBP16.52■□□□□ 0.24
PABPC1-215ENST00000520804 TUSC1Q2TAM9 212 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 GLYATQ6IB77 296 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 SLC27A4Q6P1M0 643 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 FBXW12Q6X9E4 464 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 ATG16L2Q8NAA4 619 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 OR5L1Q8NGL2 311 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 DHRS1Q96LJ7 313 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 FUZQ9BT04 418 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 GCM1Q9NP62 436 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 KRCC1Q9NPI7 259 aaPredicted RBP16.52■□□□□ 0.24
PABPC1-215ENST00000520804 DDX28Q9NUL7 540 aaKnown RBP16.52■□□□□ 0.24
PABPC1-215ENST00000520804 DCAF13Q9NV06 445 aaKnown RBP16.52■□□□□ 0.24
PABPC1-215ENST00000520804 PTTG3PQ9NZH4 202 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 SAMD4AQ9UPU9 718 aaKnown RBP16.52■□□□□ 0.24
PABPC1-215ENST00000520804 POLR1DQ9Y2S0 133 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 INSIG2Q9Y5U4 225 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 AUP1Q9Y679 476 aa16.52■□□□□ 0.24
PABPC1-215ENST00000520804 DIRAS1O95057 198 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 GPANK1O95872 356 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 CRABP1P29762 137 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 MDH2P40926 338 aaKnown RBP16.51■□□□□ 0.23
PABPC1-215ENST00000520804 HIST1H3AP68431 136 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 ARMCX4Q5H9R4 360 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 HIST2H3PS2Q5TEC6 136 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 OR2T2Q6IF00 324 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 PGM2L1Q6PCE3 622 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 DNM1P34Q6PK57 102 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 SMARCD3Q6STE5 483 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 HIST2H3AQ71DI3 136 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 MUC20Q8N307 709 aaPredicted RBP16.51■□□□□ 0.23
PABPC1-215ENST00000520804 FAM86B1Q8N7N1 296 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 GJC3Q8NFK1 279 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 OR8G5Q8NG78 346 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 OR52J3Q8NH60 311 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 APOBEC3DQ96AK3 386 aaPredicted RBP16.51■□□□□ 0.23
PABPC1-215ENST00000520804 TSSK2Q96PF2 358 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 GPA33Q99795 319 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 COQ7Q99807 217 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 HDHD2Q9H0R4 259 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 NUP50Q9UKX7 468 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 LHFPL6Q9Y693 200 aa16.51■□□□□ 0.23
PABPC1-215ENST00000520804 CEACAM18A8MTB9 384 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 IFNL4K9M1U5 179 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 DCTN6O00399 190 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 CENPAP49450 140 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 KRT72Q14CN4 511 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 MEP1BQ16820 701 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 ESCO2Q56NI9 601 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 HSP90B2PQ58FF3 399 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 AWAT1Q58HT5 328 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 KLF17Q5JT82 389 aaPredicted RBP16.5■□□□□ 0.23
PABPC1-215ENST00000520804 OR10AD1Q8NGE0 317 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 OR13G1Q8NGZ3 307 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 CMTM5Q96DZ9 223 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 MEGF10Q96KG7 1140 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 ZNF582Q96NG8 517 aaPredicted RBP16.5■□□□□ 0.23
PABPC1-215ENST00000520804 MRI1Q9BV20 369 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 SPAG4Q9NPE6 437 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 B9D1Q9UPM9 204 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 PPIAL4AQ9Y536 164 aa16.5■□□□□ 0.23
PABPC1-215ENST00000520804 IGLV1-36A0A0B4J1U3 117 aa16.49■□□□□ 0.23
PABPC1-215ENST00000520804 PPP1R3DO95685 299 aa16.49■□□□□ 0.23
PABPC1-215ENST00000520804 WNT2P09544 360 aa16.49■□□□□ 0.23
PABPC1-215ENST00000520804 EGR1P18146 543 aa16.49■□□□□ 0.23
PABPC1-215ENST00000520804 COX10Q12887 443 aa16.49■□□□□ 0.23
PABPC1-215ENST00000520804 CORO6Q6QEF8 472 aa16.49■□□□□ 0.23
PABPC1-215ENST00000520804 RBMS3Q6XE24 437 aaKnown RBP16.49■□□□□ 0.23
PABPC1-215ENST00000520804 DOK3Q7L591 496 aa16.49■□□□□ 0.23
PABPC1-215ENST00000520804 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.49■□□□□ 0.23
PABPC1-215ENST00000520804 SIGLECL1Q8N7X8 197 aa16.49■□□□□ 0.23
PABPC1-215ENST00000520804 SGMS2Q8NHU3 365 aa16.49■□□□□ 0.23
PABPC1-215ENST00000520804 ZNF420Q8TAQ5 688 aaPredicted RBP16.49■□□□□ 0.23
PABPC1-215ENST00000520804 ERMAPQ96PL5 475 aaPredicted RBP16.49■□□□□ 0.23
PABPC1-215ENST00000520804 MYLK2Q9H1R3 596 aa16.49■□□□□ 0.23
PABPC1-215ENST00000520804 ZNF69Q9UC07 566 aa16.49■□□□□ 0.23
PABPC1-215ENST00000520804 OR5V1Q9UGF6 321 aa16.49■□□□□ 0.23
PABPC1-215ENST00000520804 IQCF6A8MYZ5 107 aa16.48■□□□□ 0.23
PABPC1-215ENST00000520804 H0YL77 283 aa16.48■□□□□ 0.23
PABPC1-215ENST00000520804 MLNRO43193 412 aa16.48■□□□□ 0.23
PABPC1-215ENST00000520804 SPRY1O43609 319 aaPredicted RBP16.48■□□□□ 0.23
PABPC1-215ENST00000520804 GMNNO75496 209 aa16.48■□□□□ 0.23
PABPC1-215ENST00000520804 CPT2P23786 658 aa16.48■□□□□ 0.23
PABPC1-215ENST00000520804 SRP9P49458 86 aaKnown RBP16.48■□□□□ 0.23
PABPC1-215ENST00000520804 RSPO1Q2MKA7 263 aaPredicted RBP16.48■□□□□ 0.23
PABPC1-215ENST00000520804 RFX4Q33E94 735 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms