RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 CLDN6P56747 220 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 CD276Q5ZPR3 534 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 B3GNTL1Q67FW5 361 aaPredicted RBP9.09□□□□□ -0.95
MCF2-209ENST00000520602 C6orf15Q6UXA7 325 aaPredicted RBP9.09□□□□□ -0.95
MCF2-209ENST00000520602 TMPPEQ6ZT21 453 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 COQ8AQ8NI60 647 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 OIT3Q8WWZ8 545 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 THOC3Q96J01 351 aaKnown RBP9.09□□□□□ -0.95
MCF2-209ENST00000520602 DDOQ99489 341 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 CHRNA10Q9GZZ6 450 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 CST11Q9H112 138 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 GSKIPQ9P0R6 139 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 MRPS28Q9Y2Q9 187 aaKnown RBP9.09□□□□□ -0.95
MCF2-209ENST00000520602 RHBDD3Q9Y3P4 386 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 TMEM221A6NGB7 291 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 K7ESF4 209 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 MTRF1O75570 445 aaKnown RBP9.08□□□□□ -0.96
MCF2-209ENST00000520602 PNPP00491 289 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 GUSBP08236 651 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 FREM3P0C091 2139 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 ABOP16442 354 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 MAP2K6P52564 334 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 DLX5P56178 289 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 ARPC4P59998 168 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 TNK1Q13470 666 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 GLIPR1L1Q6UWM5 242 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 OR52B4Q8NGK2 314 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 PIGTQ969N2 578 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 RDH8Q9NYR8 311 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 MAB21L2Q9Y586 359 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 XRCC3O43542 346 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 CXCL13O43927 109 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 CD34P28906 385 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 KIR3DL2P43630 455 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 ZNF121P58317 390 aaPredicted RBP9.08□□□□□ -0.96
MCF2-209ENST00000520602 POU4F3Q15319 338 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 RAB12Q6IQ22 244 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 BPHLQ86WA6 291 aaPredicted RBP9.08□□□□□ -0.96
MCF2-209ENST00000520602 C17orf82Q86X59 251 aaPredicted RBP9.08□□□□□ -0.96
MCF2-209ENST00000520602 FAM71CQ8NEG0 241 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 OR1M1Q8NGA1 313 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 ASB10Q8WXI3 467 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 KCNJ15Q99712 375 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 PILRBQ9UKJ0 227 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 THADAQ6YHU6 1953 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 TMEM82A0PJX8 343 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 PRR32B1ATL7 298 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 TXNDC12O95881 172 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 APOC1P02654 83 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 FCGR2AP12318 317 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 ENPP1P22413 925 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 GABRR1P24046 479 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 CAPZA1P52907 286 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 MFAP5Q13361 173 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 FAM189A2Q15884 450 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 ST3GAL2Q16842 350 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 CHRFAM7AQ494W8 412 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 PRSS35Q8N3Z0 413 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 OR4C16Q8NGL9 310 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 NUDCD2Q8WVJ2 157 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 ROBO4Q8WZ75 1007 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 SEC22AQ96IW7 307 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 HIST1H2AAQ96QV6 131 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 NPAS1Q99742 590 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 TMEM59Q9BXS4 323 aa9.08□□□□□ -0.96
MCF2-209ENST00000520602 RALGAPA1Q6GYQ0 2036 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 SC5DO75845 299 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 GLSO94925 669 aaPredicted RBP9.07□□□□□ -0.96
MCF2-209ENST00000520602 ANKRD34CP0C6C1 535 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 CCL3P10147 92 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 MPLP40238 635 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 EFNB2P52799 333 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 ZNF767PQ75MW2 155 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 CSNK2A3Q8NEV1 391 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 GJC3Q8NFK1 279 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 OR10K1Q8NGX5 313 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 CMBLQ96DG6 245 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 UBL7Q96S82 380 aaPredicted RBP9.07□□□□□ -0.96
MCF2-209ENST00000520602 SPSB2Q99619 263 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 ZNF436Q9C0F3 470 aaPredicted RBP9.07□□□□□ -0.96
MCF2-209ENST00000520602 MRPL22Q9NWU5 206 aaKnown RBP9.07□□□□□ -0.96
MCF2-209ENST00000520602 HDGFL3Q9Y3E1 203 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 PCDHGA9Q9Y5G4 932 aaKnown RBP9.07□□□□□ -0.96
MCF2-209ENST00000520602 COL4A3Q01955 1670 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 TEX13DA0A0J9YY54 714 aaPredicted RBP9.07□□□□□ -0.96
MCF2-209ENST00000520602 FAM166BA8MTA8 275 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 F5H5P2 479 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 ZNF354AO60765 605 aaPredicted RBP9.07□□□□□ -0.96
MCF2-209ENST00000520602 MSR1P21757 451 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 THBS2P35442 1172 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 HTR5AP47898 357 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 RSU1Q15404 277 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 LCN10Q6JVE6 187 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 CFAP77Q6ZQR2 320 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 ZNF100Q8IYN0 542 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 ZNF687Q8N1G0 1237 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 NKAIN3Q8N8D7 197 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 NOXO1Q8NFA2 376 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 THAP6Q8TBB0 222 aa9.07□□□□□ -0.96
MCF2-209ENST00000520602 ZFAND1Q8TCF1 268 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms