RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 LSM3P62310 102 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 PPIAP62937 165 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 PSPHP78330 225 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 LIPEQ05469 1076 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 FGL1Q08830 312 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 SCRN3Q0VDG4 424 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 PPP1R8Q12972 351 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 MAB21L1Q13394 359 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 EXOSC2Q13868 293 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 KLF5Q13887 457 aaPredicted RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 MAD2L1BPQ15013 274 aaPredicted RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 KIAA0040Q15053 153 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 SSX1Q16384 188 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 CYP51A1Q16850 503 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 TATDN3Q17R31 274 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 Q1RN00 199 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 RFX4Q33E94 735 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 FAM74A3Q4VXF1 159 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 PAGE3Q5JUK9 113 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF678Q5SXM1 525 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 C10orf91Q5T1B1 145 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 PDZK1Q5T2W1 519 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 LINC00242Q5T6M2 205 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 LRRC66Q68CR7 880 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ELP2Q6IA86 826 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 STEAP1BQ6NZ63 245 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 FAHD1Q6P587 224 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 C5orf46Q6UWT4 87 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 PAMR1Q6UXH9 720 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 UNC5DQ6UXZ4 953 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 MOB2Q70IA6 237 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 UTS2BQ765I0 119 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 HSD17B13Q7Z5P4 300 aaPredicted RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 SCD5Q86SK9 330 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 TAC4Q86UU9 113 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 SERINC5Q86VE9 423 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 CALHM3Q86XJ0 350 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 HS3ST5Q8IZT8 346 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 SPAG16Q8N0X2 631 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 LINC00612Q8N6U2 182 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 OR2T4Q8NH00 348 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 CNIH3Q8TBE1 160 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 SLC13A3Q8WWT9 602 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 RAD51AP1Q96B01 352 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 UPRTQ96BW1 309 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ZBED6CLQ96FA7 236 aaPredicted RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 MRPL48Q96GC5 212 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 MSANTD3Q96H12 275 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 NSMCE2Q96MF7 247 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 Q96MT0 163 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 RNF145Q96MT1 663 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 TRNT1Q96Q11 434 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 APOL2Q9BQE5 337 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF251Q9BRH9 671 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 MED10Q9BTT4 135 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 DPH7Q9BTV6 452 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ST6GALNAC5Q9BVH7 336 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 CDCA4Q9BXL8 241 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 BEX2Q9BXY8 128 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 GABARAPL3Q9BY60 117 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 C6orf62Q9GZU0 229 aaPredicted RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 SLC22A4Q9H015 551 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 DNTTIP1Q9H147 329 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ING2Q9H160 280 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ZBP1Q9H171 429 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 PIGUQ9H490 435 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 FBXO44Q9H4M3 255 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 RNF167Q9H6Y7 350 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 RANBP3Q9H6Z4 567 aaPredicted RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 TRIM45Q9H8W5 580 aaPredicted RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 CAB39LQ9H9S4 337 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 RBM22Q9NW64 420 aaKnown RBP eCLIP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 RBFOX1Q9NWB1 397 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 DDIT4Q9NX09 232 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 SDHAF2Q9NX18 166 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 BABAM2Q9NXR7 383 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 MLXQ9UH92 298 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 AURKCQ9UQB9 309 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 SCML2Q9UQR0 700 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 PIN4Q9Y237 131 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 BTRCQ9Y297 605 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 RPH3AQ9Y2J0 694 aaPredicted RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 MRPS7Q9Y2R9 242 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 SLC6A5Q9Y345 797 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 TPRKBQ9Y3C4 175 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ALG5Q9Y673 324 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 SLC22A7Q9Y694 548 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 CDH10Q9Y6N8 788 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 U3KQV3 271 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF106Q9H2Y7 1883 aaKnown RBP2.53□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF236Q9UL36 1845 aa2.53□□□□□ -2
HMGB1P41-201ENST00000520234 RALGAPA2Q2PPJ7 1873 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 WDR90Q96KV7 1748 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 A0A096LPI6 279 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 A0A0A6YYD4 124 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 CCL15-CCL14A0A0B4J2E2 113 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 A0A0J9YYE9 177 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 CXorf51AA0A1B0GTR3 108 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 C9orf170A2RU37 121 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms