RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 IPCEF1Q8WWN9 437 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 MRPL24Q96A35 216 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 Q96MF0 132 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 DOK1Q99704 481 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 SYT3Q9BQG1 590 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 MMADHCQ9H3L0 296 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 WDR76Q9H967 626 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC25A19Q9HC21 320 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 NGBQ9NPG2 151 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 STX18Q9P2W9 335 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 GRHPRQ9UBQ7 328 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 TMCC3Q9ULS5 477 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 HEATR1Q9H583 2144 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 CSPG4Q6UVK1 2322 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 IGLV3-9A0A075B6K5 115 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 ZSCAN5BA6NJL1 495 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 SAC3D1A6NKF1 404 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 ANKRD65E5RJM6 399 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 H7C1Q1 480 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 SURF4O15260 269 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 DOK2O60496 412 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 CRYAAP02489 173 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 SPI1P17947 270 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 GRK5P34947 590 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 ALDH3B1P43353 468 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 RPS6KA3P51812 740 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 ATP5J2P56134 94 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 PPP2R2BQ00005 443 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 CDK5Q00535 292 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 COX10Q12887 443 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 DAG1Q14118 895 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 PCK2Q16822 640 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 KDM4DQ6B0I6 523 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 GLB1L2Q8IW92 636 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 CCDC36Q8IYA8 594 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 PIGTQ969N2 578 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 CIB1Q99828 191 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 SEMA6AQ9H2E6 1030 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 TPK1Q9H3S4 243 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 RERGLQ9H628 205 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 KRCC1Q9NPI7 259 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 CMC2Q9NRP2 79 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 POU2F3Q9UKI9 436 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 OAZ3Q9UMX2 235 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 FKBP7Q9Y680 259 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 TANC2Q9HCD6 1990 aa6.16□□□□□ -1.42
TOPBP1-207ENST00000509162 SETD2Q9BYW2 2564 aaPredicted RBP6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 ZAR1LA6NP61 321 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 VWC2LB2RUY7 222 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 LYNX1G3V0Z9 82 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 DLGAP1O14490 977 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 XKRYO14609 159 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 AHCYL1O43865 530 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 PRKYO43930 277 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 SELENOFO60613 162 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 ENTPD5O75356 428 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 PEX14O75381 377 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 ATP5HO75947 161 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 IGLV1-40P01703 118 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 LYNX1P0DP58 116 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 OSMP13725 252 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 NPR2P20594 1047 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 STOMP27105 288 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 APOBEC3AP31941 199 aaPredicted RBP6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 GLRXP35754 106 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 SERPINF1P36955 418 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 IFNGR2P38484 337 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 ECI1P42126 302 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 HTR5AP47898 357 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 PPOXP50336 477 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 MMP15P51511 669 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 MECP2P51608 486 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC25A1P53007 311 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 EFNB1P98172 346 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 TEKQ02763 1124 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 TNK1Q13470 666 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 AQP6Q13520 282 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 GK3PQ14409 553 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 GINS1Q14691 196 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 RAB35Q15286 201 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC36A2Q495M3 483 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 ELFN2Q5R3F8 820 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 C12orf73Q69YU5 71 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 TMEM53Q6P2H8 277 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 Q6ZR03 302 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 CCDC121Q6ZUS5 278 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 RRM2BQ7LG56 351 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 TIGD4Q8IY51 512 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 FBXL14Q8N1E6 418 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 PARP8Q8N3A8 854 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 OR2T33Q8NG76 320 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 OR4F15Q8NGB8 312 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 OR5K1Q8NHB7 308 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC25A40Q8TBP6 338 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 ST7LQ8TDW4 575 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 PTP4A1Q93096 173 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 YIPF5Q969M3 257 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 MARS2Q96GW9 593 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 RBP7Q96R05 134 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 MBOAT4Q96T53 435 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms