RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 KRT84Q9NSB2 600 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 MRPL22Q9NWU5 206 aaKnown RBP11.24□□□□□ -0.61
TCOF1-209ENST00000506630 TAAR3PQ9P1P4 343 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 GRIP1Q9Y3R0 1128 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 TANC2Q9HCD6 1990 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 OR6C6A6NF89 314 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 ZNF250P15622 560 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 PAICSP22234 425 aaKnown RBP11.23□□□□□ -0.61
TCOF1-209ENST00000506630 GCH1P30793 250 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 RPS27P42677 84 aaKnown RBP11.23□□□□□ -0.61
TCOF1-209ENST00000506630 DAPP51397 102 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 SLC25A1P53007 311 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 PPP1CBP62140 327 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 ZNF718Q3SXZ3 478 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 ELFN2Q5R3F8 820 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 SLC18B1Q6NT16 456 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 FAHD1Q6P587 224 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 CFAP77Q6ZQR2 320 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 ZDHHC13Q8IUH4 622 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 SNX33Q8WV41 574 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 NEU4Q8WWR8 484 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-209ENST00000506630 FAM168AQ92567 244 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 PLEKHA8Q96JA3 519 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 RAB3IPQ96QF0 476 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-209ENST00000506630 COQ7Q99807 217 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 TEX12Q9BXU0 123 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 BEX2Q9BXY8 128 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 NMNAT2Q9BZQ4 307 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 OR2J1Q9GZK6 312 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 GABARAPL1Q9H0R8 117 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-209ENST00000506630 CYB5R1Q9UHQ9 305 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 ATPIF1Q9UII2 106 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 COMMD3-BMI1R4GMX3 469 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 ABCA1O95477 2261 aa11.23□□□□□ -0.61
TCOF1-209ENST00000506630 IGLV3-9A0A075B6K5 115 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 IGHV4-30-2A0A087WSY4 118 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 SURF4O15260 269 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 ICMTO60725 284 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 NGFP01138 241 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 DBHP09172 617 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 SPARCP09486 303 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 CSF3P09919 207 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 NAT2P11245 290 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 FMO3P31513 532 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 GGT2P36268 569 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 MPV17P39210 176 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 ENTPD1P49961 510 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 PDLIM4P50479 330 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 CRISP1P54107 249 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 DSCR9P59020 149 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 HIST1H3AP68431 136 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 CDK5Q00535 292 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 HIST2H3PS2Q5TEC6 136 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 TMEM236Q5W0B7 351 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 DNM1P46Q6ZS02 220 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 HIST2H3AQ71DI3 136 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 PARP8Q8N3A8 854 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 ZNF511Q8NB15 262 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 IPCEF1Q8WWN9 437 aaPredicted RBP11.22□□□□□ -0.61
TCOF1-209ENST00000506630 MARS2Q96GW9 593 aaKnown RBP11.22□□□□□ -0.61
TCOF1-209ENST00000506630 PITX2Q99697 317 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 ATF6BQ99941 703 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 HCAR1Q9BXC0 346 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 OR51V1Q9H2C8 321 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 SLC25A19Q9HC21 320 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 SLCO1C1Q9NYB5 712 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 GPR160Q9UJ42 338 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 KCNG2Q9UJ96 466 aa11.22□□□□□ -0.61
TCOF1-209ENST00000506630 SVEP1Q4LDE5 3571 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 SAC3D1A6NKF1 404 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 PRR23D1E9PI22 279 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-209ENST00000506630 MITFO75030 526 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-209ENST00000506630 HMGN1P05114 100 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 PRR23D2P0DMB1 279 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-209ENST00000506630 PSKH1P11801 424 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 BLVRAP53004 296 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 KRTAP24-1Q3LI83 254 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 C6orf52Q5T4I8 152 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 ZFP1Q6P2D0 407 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 PLBD1Q6P4A8 553 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 ERI1Q8IV48 349 aaKnown RBP11.21□□□□□ -0.61
TCOF1-209ENST00000506630 C1orf174Q8IYL3 243 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 KLF14Q8TD94 323 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-209ENST00000506630 CENPNQ96H22 339 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-209ENST00000506630 DCLRE1CQ96SD1 692 aaKnown RBP11.21□□□□□ -0.61
TCOF1-209ENST00000506630 PIMREGQ9BSJ6 248 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 MS4A5Q9H3V2 200 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 POFUT1Q9H488 388 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 WDR76Q9H967 626 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 MYOZ1Q9NP98 299 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-209ENST00000506630 TBCCD1Q9NVR7 557 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 TVP23BQ9NYZ1 205 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 OAZ3Q9UMX2 235 aa11.21□□□□□ -0.61
TCOF1-209ENST00000506630 DYSFO75923 2080 aa11.21□□□□□ -0.62
TCOF1-209ENST00000506630 F5H5K5 113 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 H3BSA7 217 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 GLCEO94923 617 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 IGHV3-13P01766 116 aa11.2□□□□□ -0.62
TCOF1-209ENST00000506630 MT-ND5P03915 603 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms