RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 LYPLAL1Q5VWZ2 237 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 CCDC144NLQ6NUI1 221 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 Q6ZVU0 165 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TMBIM1Q969X1 311 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 RBP7Q96R05 134 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 NKX3-1Q99801 234 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TMEM38AQ9H6F2 299 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ZNF331Q9NQX6 463 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 LIN7CQ9NUP9 197 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 PEMTQ9UBM1 199 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ST6GALNAC2Q9UJ37 374 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ZNF256Q9Y2P7 627 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TEX264Q9Y6I9 313 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TBC1D3DA0A087WVF3 549 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TBC1D3IA0A087WXS9 549 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TBC1D3EA0A087X179 549 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 KIR2DS1A0A191URI9 304 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 C7orf72A4D263 438 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 GLOD5A6NK44 160 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TBC1D3LB9A6J9 549 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 F5H5K5 113 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TBL1XO60907 577 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 NFATC1O95644 943 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TBC1D3HP0C7X1 549 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MYF5P13349 255 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 PRDX2P32119 198 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 PDX1P52945 283 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TBPL1P62380 186 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MRPS34P82930 218 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 KIR2DS1Q14954 304 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ANKRD55Q3KP44 614 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TBC1D3CQ6IPX1 549 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ZNF343Q6P1L6 599 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 LIMS2Q7Z4I7 341 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 OAFQ86UD1 273 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TMEM173Q86WV6 379 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TBC1D3Q8IZP1 549 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 OR51F2Q8NH61 342 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 HIST1H2BAQ96A08 127 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 LOXL4Q96JB6 756 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TEPSINQ96N21 525 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 SPAG8Q99932 426 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MARVELD1Q9BSK0 173 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 TWSG1Q9GZX9 223 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MMP26Q9NRE1 261 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MBNL3Q9NUK0 354 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 FAM208AQ9UK61 1670 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MEIS3P1A6NDR6 274 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 NAP1L6A6NFF2 107 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MOSPD3O75425 235 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ACRP10323 421 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 MRPS11P82912 194 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 IRF9Q00978 393 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 SEMG2Q02383 582 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 AWAT1Q58HT5 328 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 RPL7L1Q6DKI1 246 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ZDHHC22Q8N966 263 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 VN1R17PQ8TDU5 208 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 RBM24Q9BX46 236 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 SRD5A3Q9H8P0 318 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 LYRM4Q9HD34 91 aa5.69□□□□□ -1.5
CLCN3-204ENST00000504131 FCF1Q9Y324 198 aaKnown RBP5.69□□□□□ -1.5
CLCN3-204ENST00000504131 C7orf71A4D174 169 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 A8MWP6 167 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 FAM220BPB1ANY3 271 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 TGFBR3LH3BV60 316 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 CLDN7O95471 211 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 ONECUT2O95948 504 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 HPRT1P00492 218 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 CRYAAP02489 173 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 GZMHP20718 246 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 SLC6A9P48067 706 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 SRYQ05066 204 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 AQP6Q13520 282 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 MESTQ5EB52 335 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 PYY3Q5JQD4 70 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 OR4B1Q8NGF8 309 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 OR52I2Q8NH67 350 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 INPP5KQ9BT40 448 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 SSBP4Q9BWG4 385 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-204ENST00000504131 ATG10Q9H0Y0 220 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 UQCC1Q9NVA1 299 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 A0A1W2PRS3 328 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 SLC25A27O95847 323 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 F12P00748 615 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-204ENST00000504131 SPINK8P0C7L1 97 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 CD37P11049 281 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 PIGAP37287 484 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 SSR2P43308 183 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 UCP3P55916 312 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 CLRN1P58418 232 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 GNG5P63218 68 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 MLLT11Q13015 90 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-204ENST00000504131 DNLZQ5SXM8 178 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 CHST4Q8NCG5 386 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 MRAPQ8TCY5 172 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 EDARADDQ8WWZ3 215 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 HRASLS5Q96KN8 279 aa5.68□□□□□ -1.5
CLCN3-204ENST00000504131 MSL2Q9HCI7 577 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms