RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 A0A1W2PPL8 197 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 POLR3GO15318 223 aaPredicted RBP9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 MSR1P21757 451 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 PMELP40967 661 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 PITPNBP48739 271 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 SLC18A1P54219 525 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 MTPNP58546 118 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 BPIFB3P59826 476 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 ZNF404Q494X3 552 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 FAM201AQ5SY85 155 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 LYPD2Q6UXB3 125 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 SLC30A8Q8IWU4 369 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 OR5AS1Q8N127 324 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 OR10AD1Q8NGE0 317 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 TMEM239Q8WW34 195 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 PTP4A1Q93096 173 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 PLEKHA8Q96JA3 519 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 FAM71F1Q96KD3 344 aaPredicted RBP9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 MEGF10Q96KG7 1140 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 CDADC1Q9BWV3 514 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 EMC7Q9NPA0 242 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 POLE4Q9NR33 117 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 HIF3AQ9Y2N7 669 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 POMT1Q9Y6A1 747 aa9.7□□□□□ -0.86
CACNA1C-228ENST00000492150 C12orf71A8MTZ7 269 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 C22orf46C9J442 243 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 H0YL77 283 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 TNFRSF13BO14836 293 aaPredicted RBP9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 OR5F1O95221 314 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 FSTL3O95633 263 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 RAC2P15153 192 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 TNFRSF1BP20333 461 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 GUCA1AP43080 201 aaPredicted RBP9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 HTR5AP47898 357 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 GUCY1A3Q02108 690 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 ALG10Q5BKT4 473 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 DEFB121Q5J5C9 76 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 GPR157Q5UAW9 335 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 WDR25Q64LD2 544 aaPredicted RBP9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 ZNF841Q6ZN19 808 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 ZNF620Q6ZNG0 422 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 VASH1Q7L8A9 365 aaPredicted RBP9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 DHDDSQ86SQ9 333 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 ATG16L2Q8NAA4 619 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 LRRC75AQ8NAA5 344 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 OR8B3Q8NGG8 313 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 FNDC8Q8TC99 324 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 SLC26A7Q8TE54 656 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 SLC7A6Q92536 515 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 DYRK2Q92630 601 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 OR8B2Q96RD0 313 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 CGREF1Q99674 301 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 CCDC28BQ9BUN5 200 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 KAT8Q9H7Z6 458 aaKnown RBP9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 RIMS3Q9UJD0 308 aa9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 V9GYY5 206 aaPredicted RBP9.69□□□□□ -0.86
CACNA1C-228ENST00000492150 IGHV3-64DA0A0J9YX35 117 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 MLNRO43193 412 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 SGCEO43556 437 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 GPR137BO60478 399 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 DOK2O60496 412 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 SFTPBP07988 381 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 GZMMP51124 257 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 TAS2R41P59536 307 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 CTXN1P60606 82 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 PIN1Q13526 163 aaPredicted RBP9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 FHL1Q13642 323 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 ZNF181Q2M3W8 571 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 OR2T2Q6IF00 324 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 C1orf94Q6P1W5 598 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 CCDC80Q76M96 950 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 CROCCP2Q86T23 111 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 IGFN1Q86VF2 1251 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 MOGAT3Q86VF5 341 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 DPP10Q8N608 796 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 OR8G5Q8NG78 346 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 OR13G1Q8NGZ3 307 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 SSMEM1Q8WWF3 244 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 MAGEB18Q96M61 343 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 WACQ9BTA9 647 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 PARD6BQ9BYG5 372 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 C16orf95Q9H693 158 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 NKIRAS1Q9NYS0 192 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 CLN8Q9UBY8 286 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 SH3GLB1Q9Y371 365 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 MED31Q9Y3C7 131 aa9.68□□□□□ -0.86
CACNA1C-228ENST00000492150 CENPVL3A0A0U1RRI6 287 aa9.67□□□□□ -0.86
CACNA1C-228ENST00000492150 OR6C6A6NF89 314 aa9.67□□□□□ -0.86
CACNA1C-228ENST00000492150 F5H5P2 479 aa9.67□□□□□ -0.86
CACNA1C-228ENST00000492150 H7C1C5 153 aa9.67□□□□□ -0.86
CACNA1C-228ENST00000492150 PHYHO14832 338 aa9.67□□□□□ -0.86
CACNA1C-228ENST00000492150 IGHV4-59P01825 116 aa9.67□□□□□ -0.86
CACNA1C-228ENST00000492150 VIMP08670 466 aaKnown RBP9.67□□□□□ -0.86
CACNA1C-228ENST00000492150 MMP9P14780 707 aa9.67□□□□□ -0.86
CACNA1C-228ENST00000492150 CFHR2P36980 270 aa9.67□□□□□ -0.86
CACNA1C-228ENST00000492150 SRP9P49458 86 aaKnown RBP9.67□□□□□ -0.86
CACNA1C-228ENST00000492150 MAGOHP61326 146 aaKnown RBP9.67□□□□□ -0.86
CACNA1C-228ENST00000492150 LCN6P62502 163 aa9.67□□□□□ -0.86
CACNA1C-228ENST00000492150 SCRN3Q0VDG4 424 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms