RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 MSX2P35548 267 aaPredicted RBP14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 GSSP48637 474 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 MALLQ13021 153 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 SEC23BQ15437 767 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 KCNMB1Q16558 191 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 CYP2R1Q6VVX0 501 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 KLHL36Q8N4N3 616 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 SPICQ8N5J4 248 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 ATG16L2Q8NAA4 619 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 OR2Z1Q8NG97 314 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 CMBLQ96DG6 245 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 SAMD8Q96LT4 415 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 JMJD8Q96S16 334 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 SOX7Q9BT81 388 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 YY1AP1Q9H869 796 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 PURGQ9UJV8 347 aaKnown RBP14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 LYVE1Q9Y5Y7 322 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 ZANQ9Y493 2812 aa14.09□□□□□ -0.15
PDLIM2-217ENST00000491330 J3QLI3 93 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 TNFRSF11BO00300 401 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 PNPP00491 289 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 ATP6V1B2P21281 511 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 FUT4P22083 530 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 PSG7Q13046 419 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 DCAF12L2Q5VW00 463 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 HAVCR1Q96D42 359 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 PITX2Q99697 317 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 COQ7Q99807 217 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 THTPAQ9BU02 230 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 MMADHCQ9H3L0 296 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 METTL17Q9H7H0 456 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 REEP1Q9H902 201 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 MSL2Q9HCI7 577 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 UBAP1Q9NZ09 502 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 IL19Q9UHD0 177 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 KCNG2Q9UJ96 466 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 B9D1Q9UPM9 204 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 PPP1R3CQ9UQK1 317 aa14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 NOP16Q9Y3C1 178 aaKnown RBP14.08□□□□□ -0.16
PDLIM2-217ENST00000491330 ARRDC5A6NEK1 342 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 LRRC30A6NM36 301 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 FOXH1O75593 365 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 KITLGP21583 273 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 CDKN2AP42771 156 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 SRP9P49458 86 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 LMO4P61968 165 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 CDK5R2Q13319 367 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 OR2T5Q6IEZ7 315 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 THSD4Q6ZMP0 1018 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 PHC2Q8IXK0 858 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 OR4C15Q8NGM1 316 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 OR13G1Q8NGZ3 307 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 OR2T4Q8NH00 348 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 OR2T29Q8NH02 315 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 OR4K13Q8NH42 304 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 NMNAT3Q96T66 252 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 BTBD10Q9BSF8 475 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 KLHL21Q9UJP4 597 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 BAIAP2Q9UQB8 552 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 STARD10Q9Y365 291 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 RTTNQ86VV8 2226 aa14.07□□□□□ -0.16
PDLIM2-217ENST00000491330 ZSCAN5BA6NJL1 495 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 FAM157AC9JC47 383 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 ACOT8O14734 319 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 RER1O15258 196 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 CCNB2O95067 398 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 SBK2P0C263 348 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 ZNF26P17031 533 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 CPT2P23786 658 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 RAD23AP54725 363 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 TPTEP56180 551 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 COX10Q12887 443 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 ZNF620Q6ZNG0 422 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 C1orf87Q8N0U7 546 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 MUC20Q8N307 709 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 SPTSSAQ969W0 71 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 RPRD1BQ9NQG5 326 aaKnown RBP14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 TMEM106BQ9NUM4 274 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 IL20Q9NYY1 176 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 NPTNQ9Y639 398 aa14.06□□□□□ -0.16
PDLIM2-217ENST00000491330 DNAJC8O75937 253 aaPredicted RBP14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 UBOX5O94941 541 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 SCG5P05408 212 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 IRF2P14316 349 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 HIST1H1CP16403 213 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 FPR2P25090 351 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 BLVRAP53004 296 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 FXYD6P3P58550 94 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 MS4A2Q01362 244 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 MICAQ29983 383 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 PGBD2Q6P3X8 592 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 RASSF6Q6ZTQ3 369 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 PTCHD4Q6ZW05 846 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 PROKR2Q8NFJ6 384 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 OR8G5Q8NG78 346 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 OR52E2Q8NGJ4 325 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 NANPQ8TBE9 248 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 C19orf24Q9BVV8 132 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 DGCR6LQ9BY27 220 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms