RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 WDR38Q5JTN6 314 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 ELFN2Q5R3F8 820 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 SFRP5Q5T4F7 317 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 GPR107Q5VW38 600 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 LIPKQ5VXJ0 399 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 TMEM211Q6ICI0 200 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 ZNF774Q6NX45 483 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 RPL22L1Q6P5R6 122 aaKnown RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 CD200R1LQ6Q8B3 271 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 STAC2Q6ZMT1 411 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 BEND4Q6ZU67 534 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 FAM220AQ7Z4H9 259 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 DPPA2Q7Z7J5 298 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 MRGPRGQ86SM5 289 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 CXorf67Q86X51 503 aaPredicted RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 CATSPERDQ86XM0 798 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 ZNF584Q8IVC4 421 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 PRSS35Q8N3Z0 413 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 C17orf78Q8N4C9 275 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 YIPF7Q8N8F6 280 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 GALNT11Q8NCW6 608 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 CPEB3Q8NE35 698 aaKnown RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 OR2G2Q8NGZ5 317 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 AKR7LQ8NHP1 331 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 HAVCR2Q8TDQ0 301 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 RGP1Q92546 391 aaPredicted RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 RND1Q92730 232 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 UFD1Q92890 307 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 RPL3LQ92901 407 aaKnown RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 SMIM19Q96E16 107 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 TRMT61AQ96FX7 289 aaKnown RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 C4orf45Q96LM5 186 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 DCLRE1CQ96SD1 692 aaKnown RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 MYCBPQ99417 103 aaPredicted RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 DOK1Q99704 481 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 COQ7Q99807 217 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 ATF6BQ99941 703 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 MROQ9BYG7 248 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 HDHD2Q9H0R4 259 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 G6PC2Q9NQR9 355 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 SLC17A5Q9NRA2 495 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 FRRS1LQ9P0K9 344 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 ATPIF1Q9UII2 106 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 ENPP5Q9UJA9 477 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 SLC5A6Q9Y289 635 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 TIMM10BQ9Y5J6 103 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 R4GMQ9 66 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 ZGRF1Q86YA3 2104 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 PNMA8CA0A1B0GUJ8 204 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 CCL21O00585 134 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 DOK2O60496 412 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 GPX5O75715 221 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 SC5DO75845 299 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 RPP14O95059 124 aaKnown RBP7.18□□□□□ -1.26
USP4-210ENST00000483212 ZFPL1O95159 310 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 UBL3O95164 117 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 DBHP09172 617 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 COX5BP10606 129 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 CELP19835 753 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 PSMB1P20618 241 aaKnown RBP7.18□□□□□ -1.26
USP4-210ENST00000483212 BMP5P22003 454 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 GADD45AP24522 165 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 GABRA5P31644 462 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 CCKARP32238 428 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 CRYBB2P43320 205 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 UQCRFS1P47985 274 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 CCR9P51686 369 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 PCBD1P61457 104 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 GRB2P62993 217 aaKnown RBP7.18□□□□□ -1.26
USP4-210ENST00000483212 TUBA1BP68363 451 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 TGFBR3Q03167 851 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 TLE1Q04724 770 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 ALKBH1Q13686 389 aaKnown RBP7.18□□□□□ -1.26
USP4-210ENST00000483212 SLC36A2Q495M3 483 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 PABPC1L2AQ5JQF8 200 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 ARL9Q6T311 187 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 TUBA1AQ71U36 451 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 LUZP2Q86TE4 346 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 P2RY8Q86VZ1 359 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 CLVS1Q8IUQ0 354 aaPredicted RBP7.18□□□□□ -1.26
USP4-210ENST00000483212 OR1F12Q8NHA8 337 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 ZNF420Q8TAQ5 688 aaPredicted RBP7.18□□□□□ -1.26
USP4-210ENST00000483212 SLC7A6Q92536 515 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 PPP1R14AQ96A00 147 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 ISOC1Q96CN7 298 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 KCNJ15Q99712 375 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 FAM192AQ9GZU8 254 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 OR51E2Q9H255 320 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 NIPAL2Q9H841 368 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 CENPMQ9NSP4 180 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 PLEK2Q9NYT0 353 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 NDUFA13Q9P0J0 144 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 CACNA1BQ00975 2339 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 NCOA6Q14686 2063 aaPredicted RBP7.18□□□□□ -1.26
USP4-210ENST00000483212 RELNP78509 3460 aa7.18□□□□□ -1.26
USP4-210ENST00000483212 INTS1Q8N201 2190 aaKnown RBP7.18□□□□□ -1.26
USP4-210ENST00000483212 LOC100509620A0A075B734 347 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 CIB4A0PJX0 185 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 C5orf63A6NC05 138 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 OR5H1A6NKK0 313 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms