RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ZNF823P16415 610 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 GSSP48637 474 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 HMGA2P52926 109 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 LMO4P61968 165 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 MVKQ03426 396 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 SEC23BQ15437 767 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 FAM98BQ52LJ0 330 aaKnown RBP9.72□□□□□ -0.85
CCM2-213ENST00000480658 DCAF12L2Q5VW00 463 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 THSD4Q6ZMP0 1018 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 USP43Q70EL4 1123 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 TSEN54Q7Z6J9 526 aaKnown RBP9.72□□□□□ -0.85
CCM2-213ENST00000480658 DHFR2Q86XF0 187 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 PHC2Q8IXK0 858 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 CELF2-AS1Q8N7Q2 184 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 ERGIC1Q969X5 290 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 ATF6BQ99941 703 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 SOX7Q9BT81 388 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 NARFLQ9H6Q4 476 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 TMEM106BQ9NUM4 274 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 TREM2Q9NZC2 230 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 PPP1R3CQ9UQK1 317 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 NPTNQ9Y639 398 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 V9GYQ6 96 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.72□□□□□ -0.852e-7■■■□□ 15.8
CCM2-213ENST00000480658 TNFRSF11BO00300 401 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 CCNB2O95067 398 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 FAM107AO95990 144 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 NGFP01138 241 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 IFNGP01579 166 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 ZNF26P17031 533 aaPredicted RBP9.71□□□□□ -0.86
CCM2-213ENST00000480658 MDH2P40926 338 aaKnown RBP9.71□□□□□ -0.86
CCM2-213ENST00000480658 MAGEA2P43356 314 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 RAD23AP54725 363 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 FXYD6P3P58550 94 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 HIST1H3AP68431 136 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 MZT1Q08AG7 82 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 KCNJ8Q15842 424 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 HIST2H3PS2Q5TEC6 136 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 LCN8Q6JVE9 175 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 FAHD2BQ6P2I3 314 aaPredicted RBP9.71□□□□□ -0.86
CCM2-213ENST00000480658 PTCHD4Q6ZW05 846 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 HIST2H3AQ71DI3 136 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 MEX3DQ86XN8 651 aaKnown RBP9.71□□□□□ -0.86
CCM2-213ENST00000480658 ZNF283Q8N7M2 679 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 FAM86B1Q8N7N1 296 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 SLC26A10Q8NG04 563 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 OR2Z1Q8NG97 314 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 NANPQ8TBE9 248 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 CMBLQ96DG6 245 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 ASB9Q96DX5 294 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 FAHD2AQ96GK7 314 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 LRGUKQ96M69 825 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 NMNAT3Q96T66 252 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 C1orf21Q9H246 121 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 REEP1Q9H902 201 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 SP140LQ9H930 580 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 TRIM36Q9NQ86 728 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 RPRD1BQ9NQG5 326 aaKnown RBP9.71□□□□□ -0.86
CCM2-213ENST00000480658 IL20Q9NYY1 176 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 GMPR2Q9P2T1 348 aaKnown RBP9.71□□□□□ -0.86
CCM2-213ENST00000480658 IL20RAQ9UHF4 553 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 B9D1Q9UPM9 204 aa9.71□□□□□ -0.86
CCM2-213ENST00000480658 YLPM1P49750 1951 aaKnown RBP9.7□□□□□ -0.86
CCM2-213ENST00000480658 IGLV1-36A0A0B4J1U3 117 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 FAM157AC9JC47 383 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 RER1O15258 196 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 DEAF1O75398 565 aaPredicted RBP9.7□□□□□ -0.86
CCM2-213ENST00000480658 DIRAS1O95057 198 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 APOC1P02654 83 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 IRF2P14316 349 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 HIST1H1CP16403 213 aaKnown RBP9.7□□□□□ -0.86
CCM2-213ENST00000480658 ZNF3P17036 446 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 CDKN2AP42771 156 aaKnown RBP9.7□□□□□ -0.86
CCM2-213ENST00000480658 TPTEP56180 551 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 BTG1P62324 171 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 TRIM25Q14258 630 aaKnown RBP9.7□□□□□ -0.86
CCM2-213ENST00000480658 SNCBQ16143 134 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 ZNF181Q2M3W8 571 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 AVPI1Q5T686 147 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 PGBD2Q6P3X8 592 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 RASSF6Q6ZTQ3 369 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 IL17RELQ6ZVW7 336 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 NLRC3Q7RTR2 1065 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 CCDC197Q8NCU1 140 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 PROKR2Q8NFJ6 384 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 OR2T33Q8NG76 320 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 OR8G5Q8NG78 346 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 OR4K13Q8NH42 304 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 PITX2Q99697 317 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 C19orf24Q9BVV8 132 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 SUCNR1Q9BXA5 334 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 C1QTNF5Q9BXJ0 243 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 TEX12Q9BXU0 123 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 OCEL1Q9H607 264 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 METTL17Q9H7H0 456 aaPredicted RBP9.7□□□□□ -0.86
CCM2-213ENST00000480658 YY1AP1Q9H869 796 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 MSL2Q9HCI7 577 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 G6PC2Q9NQR9 355 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 CYB5R1Q9UHQ9 305 aa9.7□□□□□ -0.86
CCM2-213ENST00000480658 LRCH1Q9Y2L9 728 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 181.8 ms