RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 H7C1Q1 480 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 SLC16A6O15403 523 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 PRODHO43272 600 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 SSX4O60224 188 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 LCKP06239 509 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 SPI1P17947 270 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 GCH1P30793 250 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 FMO3P31513 532 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 PDLIM4P50479 330 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 EFNB1P98172 346 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 LOXL1Q08397 574 aaPredicted RBP10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 CRMP1Q14194 572 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 GINS1Q14691 196 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 CCDC92Q53HC0 331 aaPredicted RBP10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 C12orf73Q69YU5 71 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 SLC18B1Q6NT16 456 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 ACSM5Q6NUN0 579 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 COLCA1Q6ZS62 124 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 ZNF101Q8IZC7 436 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 ZNF786Q8N393 782 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 OR1J1Q8NGS3 322 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 OR2AJ1Q8NGZ0 328 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 C10orf105Q8TEF2 133 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 SNX33Q8WV41 574 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 FAM168AQ92567 244 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 DIRC2Q96SL1 478 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 REG4Q9BYZ8 158 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 FN3KQ9H479 309 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 RERGLQ9H628 205 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 MARCH7Q9H992 704 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 DDX28Q9NUL7 540 aaKnown RBP10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 VPS13CQ709C8 3753 aa10.6□□□□□ -0.71
CLCNKA-205ENST00000477360 RER1O15258 196 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 SURF4O15260 269 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 NDUFS7O75251 213 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 MPZL1O95297 269 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 ABHD16AO95870 558 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 HLA-DQA2P01906 255 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 HEXAP06865 529 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 FAM157BP0CG42 384 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 CCL2P13500 99 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 CCNOP22674 350 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 POU1F1P28069 291 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 EPHA2P29317 976 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 OTX1P32242 354 aaPredicted RBP10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 PPP1CBP62140 327 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 MSMPQ1L6U9 139 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 LRRC36Q1X8D7 754 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 SLC35D3Q5M8T2 416 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 KLF14Q8TD94 323 aaPredicted RBP10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 ITFG2Q969R8 447 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 APOBEC3DQ96AK3 386 aaPredicted RBP10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 MBOAT4Q96T53 435 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 VRK1Q99986 396 aaPredicted RBP10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 TOR3AQ9H497 397 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 HINT3Q9NQE9 182 aaKnown RBP10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 MRPL22Q9NWU5 206 aaKnown RBP10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 DUSP13Q9UII6 198 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 ZDHHC8Q9ULC8 765 aa10.59□□□□□ -0.71
CLCNKA-205ENST00000477360 A0A1W2PPW3 197 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 TRIM64A6NGJ6 449 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 TRIM64BA6NI03 449 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 C17orf100A8MU93 164 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 VWC2LB2RUY7 222 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 H0YAE9 185 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 GLCEO94923 617 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 APOC1P02654 83 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 ADRA2AP08913 450 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 RAC2P15153 192 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 KITLGP21583 273 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 POLR2IP36954 125 aaKnown RBP10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 ENTPD1P49961 510 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 NKPD1Q17RQ9 610 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 LINC01590Q5TEZ4 76 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 TTC23Q5W5X9 447 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 FBXW12Q6X9E4 464 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 RFPL4BQ6ZWI9 263 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 SHFQ7M4L6 423 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 CYB561A3Q8NBI2 242 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 ABHD4Q8TB40 342 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 TRUB1Q8WWH5 349 aaKnown RBP10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 PTP4A1Q93096 173 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 SPTSSAQ969W0 71 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 ATF6BQ99941 703 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 SYT3Q9BQG1 590 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 PIMREGQ9BSJ6 248 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 C1QTNF5Q9BXJ0 243 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 RIBC2Q9H4K1 309 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 PNRC2Q9NPJ4 139 aaKnown RBP10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 FAM118AQ9NWS6 357 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 TAAR3PQ9P1P4 343 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 COMMD3-BMI1R4GMX3 469 aa10.58□□□□□ -0.72
CLCNKA-205ENST00000477360 A0A096LNT2 108 aa10.57□□□□□ -0.72
CLCNKA-205ENST00000477360 PLSCR5A0PG75 271 aa10.57□□□□□ -0.72
CLCNKA-205ENST00000477360 PRR23D1E9PI22 279 aaPredicted RBP10.57□□□□□ -0.72
CLCNKA-205ENST00000477360 CD55P08174 381 aa10.57□□□□□ -0.72
CLCNKA-205ENST00000477360 PRR23D2P0DMB1 279 aaPredicted RBP10.57□□□□□ -0.72
CLCNKA-205ENST00000477360 DAOP14920 347 aa10.57□□□□□ -0.72
CLCNKA-205ENST00000477360 SELEP16581 610 aa10.57□□□□□ -0.72
CLCNKA-205ENST00000477360 ACHEP22303 614 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms