RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-229	ENST00000475651	CD207	Q9UJ71	328 aa		3.75	□□□□□ -1.81
RBM39-229	ENST00000475651	FBXL4	Q9UKA2	621 aa		3.75	□□□□□ -1.81
RBM39-229	ENST00000475651	NPIPA1	Q9UND3	350 aa		3.75	□□□□□ -1.81
RBM39-229	ENST00000475651	PPIE	Q9UNP9	301 aa	Known RBP	3.75	□□□□□ -1.81
RBM39-229	ENST00000475651	FOXJ3	Q9UPW0	622 aa		3.75	□□□□□ -1.81
RBM39-229	ENST00000475651	MRPS17	Q9Y2R5	130 aa	Known RBP	3.75	□□□□□ -1.81
RBM39-229	ENST00000475651	POLR1D	Q9Y2S0	133 aa		3.75	□□□□□ -1.81
RBM39-229	ENST00000475651	MRPS2	Q9Y399	296 aa	Known RBP	3.75	□□□□□ -1.81
RBM39-229	ENST00000475651	ADAM18	Q9Y3Q7	739 aa		3.75	□□□□□ -1.81
RBM39-229	ENST00000475651	PCDHGA9	Q9Y5G4	932 aa	Known RBP	3.75	□□□□□ -1.81
RBM39-229	ENST00000475651	UTRN	P46939	3433 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	KIAA1671	Q9BY89	1806 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	TRAV18	A0A075B6X5	111 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	TMED7-TICAM2	A0A0A6YYA0	188 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651		A0A0A6YYH2	397 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651		A0A1W2PPC4	97 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651		A0A1W2PPL8	197 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	KANTR	A0A1W2PQU2	76 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	ANKRD20A5P	A0PJZ0	165 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	GGT3P	A6NGU5	568 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	TVP23A	A6NH52	213 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	LILRA5	A6NI73	299 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651		A6NJ64	397 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	ZSCAN5B	A6NJL1	495 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651		A8MVM7	634 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	LEUTX	A8MZ59	168 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	KRBOX1	C9JBD0	128 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651		H7C417	338 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	GOSR2	O14653	212 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	MAGEB4	O15481	346 aa	Predicted RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	HCRTR1	O43613	425 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	TLX3	O43711	291 aa	Predicted RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	DUX1	O43812	170 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	GMFG	O60234	142 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	SLC16A7	O60669	478 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	ZNF254	O75437	659 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	TOX	O94900	526 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	GLS	O94925	669 aa	Predicted RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	RAB3D	O95716	219 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	PMS2P2	O95744	297 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	TXNDC12	O95881	172 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	IGKV1D-16	P01601	117 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	NGFR	P08138	427 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	H2BFM	P0C1H6	154 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	GIMD1	P0DJR0	217 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	CT45A8	P0DMV1	189 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	CT45A9	P0DMV2	189 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	TFPI	P10646	304 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	CPN1	P15169	458 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	GABRG2	P18507	467 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	EN2	P19622	333 aa	Predicted RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	DPP4	P27487	766 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	CD1C	P29017	333 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	GNAL	P38405	381 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	CDKN2A	P42771	156 aa	Known RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	GPR3	P46089	330 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	P2RX1	P51575	399 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	NR0B1	P51843	470 aa	Known RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	AGFG1	P52594	562 aa	Known RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	MAZ	P56270	477 aa	Known RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	RPL27	P61353	136 aa	Known RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	HNRNPK	P61978	463 aa	Known RBP eCLIP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	BTG2	P78543	158 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	IGLV3-21	P80748	117 aa	Predicted RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	MAT1A	Q00266	395 aa	Known RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	MC2R	Q01718	297 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	GLO1	Q04760	184 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	RPL18	Q07020	188 aa	Known RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	HYAL1	Q12794	435 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	HTR4	Q13639	388 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	ERV3-1	Q14264	604 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	FZD2	Q14332	565 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	GK2	Q14410	553 aa	Predicted RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	OPCML	Q14982	345 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	PCM1	Q15154	2024 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	NSDHL	Q15738	373 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	MPPED2	Q15777	294 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	ST3GAL2	Q16842	350 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	ODF4	Q2M2E3	257 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	CCDC157	Q569K6	752 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	CT45A2	Q5DJT8	189 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	CLVS2	Q5SYC1	327 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	ARHGAP40	Q5TG30	622 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	TMEM244	Q5VVB8	128 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	PWWP2B	Q6NUJ5	590 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	STEAP1B	Q6NZ63	245 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	MTFR2	Q6P444	385 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	NPSR1	Q6W5P4	371 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	STAC2	Q6ZMT1	411 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	ZNF704	Q6ZNC4	412 aa	Predicted RBP	3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	NDUFAF7	Q7L592	441 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	DPY19L4	Q7Z388	723 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	NR2C2AP	Q86WQ0	139 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	COMMD2	Q86X83	199 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	CDC20B	Q86Y33	519 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	ZNF584	Q8IVC4	421 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	PDZD9	Q8IXQ8	264 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	ZNF679	Q8IYX0	411 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	GALNT16	Q8N428	558 aa		3.74	□□□□□ -1.81
RBM39-229	ENST00000475651	JAGN1	Q8N5M9	183 aa		3.74	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms