RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 MYDGFQ969H8 173 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 C18orf25Q96B23 403 aaPredicted RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 RBBP8Q99708 897 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 ATP5SQ99766 215 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 UTP23Q9BRU9 249 aaKnown RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 NIPSNAP3BQ9BS92 247 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 RSG1Q9BU20 258 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 APOOQ9BUR5 198 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 ACTR3CQ9C0K3 210 aaPredicted RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 ALG9Q9H6U8 611 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 PRSS16Q9NQE7 514 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 SAMSN1Q9NSI8 373 aaKnown RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 C19orf12Q9NSK7 152 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 DCAF13Q9NV06 445 aaKnown RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 DHRS7Q9Y394 339 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 AK6Q9Y3D8 172 aaKnown RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 LRRK1Q38SD2 2015 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 ADGRA3Q8IWK6 1321 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 NSG1A0A0A6YYJ2 146 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 H7C0C1 242 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 M0QXV9 152 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 SULT1C2O00338 296 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 DCTN6O00399 190 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 MAGEB4O15481 346 aaPredicted RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 CA11O75493 328 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 ADAP1O75689 374 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 UGT2B17O75795 530 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 TOXO94900 526 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 APOEP02649 317 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 GP1BAP07359 652 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 HBQ1P09105 142 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 NQO1P15559 274 aaKnown RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 CTRB1P17538 263 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 M6PRP20645 277 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 DTYMKP23919 212 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 ATP5A1P25705 553 aaKnown RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 G0S2P27469 103 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 NSG1P42857 185 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 MAGEA3P43357 314 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 QARSP47897 775 aaKnown RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 XKP51811 444 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 KPNA2P52292 529 aaKnown RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 NKX2-5P52952 324 aaPredicted RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 CLDN6P56747 220 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 MRPS22P82650 360 aaKnown RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 RIPPLY1Q0D2K3 151 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 ST3GAL3Q11203 375 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 DPYSL3Q14195 570 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 PSG5Q15238 335 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 SF3A2Q15428 464 aaKnown RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 ZNHIT3Q15649 155 aaPredicted RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 GUK1Q16774 197 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 CYBRD1Q53TN4 286 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 RBM48Q5RL73 367 aaKnown RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 C1orf220Q5T0J3 134 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 CTRB2Q6GPI1 263 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 SMIM15Q7Z3B0 74 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 HSD11B1LQ7Z5J1 315 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 PGAM4Q8N0Y7 254 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 CYP4Z2PQ8N1L4 340 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 Q8N402 240 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 TMEM251Q8N6I4 163 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 ZNF433Q8N7K0 673 aaPredicted RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 ZSCAN4Q8NAM6 433 aaPredicted RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 NOXO1Q8NFA2 376 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 OR6K6Q8NGW6 343 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 LYPD6BQ8NI32 183 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 CNIH3Q8TBE1 160 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 FNDC8Q8TC99 324 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 AENQ8WTP8 325 aaKnown RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 IFT81Q8WYA0 676 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 TFGQ92734 400 aaPredicted RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 NTAN1Q96AB6 310 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 CCDC42Q96M95 316 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 RNF145Q96MT1 663 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 WFIKKN1Q96NZ8 548 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 CPXM1Q96SM3 734 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 CIB1Q99828 191 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 COPS4Q9BT78 406 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 MRPS26Q9BYN8 205 aaKnown RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 ZYG11BQ9C0D3 744 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 ING2Q9H160 280 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 PORCNQ9H237 461 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 OR51M1Q9H341 326 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 C12orf10Q9HB07 376 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 PLGRKTQ9HBL7 147 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 HRASLSQ9HDD0 168 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 ZNF331Q9NQX6 463 aaPredicted RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 PLEKHJ1Q9NW61 149 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 RMND1Q9NWS8 449 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 BABAM2Q9NXR7 383 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 TMCO1Q9UM00 188 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 YARS2Q9Y2Z4 477 aaKnown RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 WIF1Q9Y5W5 379 aa3.17□□□□□ -1.9
COL11A1-208ENST00000470170 RAI1Q7Z5J4 1906 aaPredicted RBP3.17□□□□□ -1.9
COL11A1-208ENST00000470170 EI24O14681 340 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 PFKFB2O60825 505 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 RCBTB2O95199 551 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms