RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ACSM3Q53FZ2 586 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 ALG10Q5BKT4 473 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 APOOLQ6UXV4 268 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 PLXDC1Q8IUK5 500 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 DEFB123Q8N688 67 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 Q8NFD4 153 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 OR2G2Q8NGZ5 317 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 PAQR8Q8TEZ7 354 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 APOBEC4Q8WW27 367 aaKnown RBP11.14□□□□□ -0.63
USP11-206ENST00000469080 ABHD1Q96SE0 405 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 ORAI3Q9BRQ5 295 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 NDUFB2O95178 105 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 HIST1H1BP16401 226 aaKnown RBP11.13□□□□□ -0.63
USP11-206ENST00000469080 AFF3P51826 1226 aaKnown RBP11.13□□□□□ -0.63
USP11-206ENST00000469080 EPHA4P54764 986 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 SNRPGP62308 76 aaKnown RBP11.13□□□□□ -0.63
USP11-206ENST00000469080 SRSF3P84103 164 aaKnown RBP11.13□□□□□ -0.63
USP11-206ENST00000469080 DGCR2P98153 550 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 CDK5Q00535 292 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 LINGO2Q7L985 606 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 RABEPKQ7Z6M1 372 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 FLVCR1-AS1Q8TAF5 88 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 STOML3Q8TAV4 291 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 SLC2A12Q8TD20 617 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 PHYHIPQ92561 330 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 MR1Q95460 341 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 KTI12Q96EK9 354 aaPredicted RBP11.13□□□□□ -0.63
USP11-206ENST00000469080 OR1F2PQ96R84 312 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 ARHGDIGQ99819 225 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 SPACA1Q9HBV2 294 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 EXOSC1Q9Y3B2 195 aaKnown RBP11.13□□□□□ -0.63
USP11-206ENST00000469080 TOX3O15405 576 aaPredicted RBP11.13□□□□□ -0.63
USP11-206ENST00000469080 EIF4EP06730 217 aaKnown RBP11.13□□□□□ -0.63
USP11-206ENST00000469080 EPXP11678 715 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 UBE2MP61081 183 aaKnown RBP11.13□□□□□ -0.63
USP11-206ENST00000469080 ATXN7L3Q14CW9 347 aaPredicted RBP11.13□□□□□ -0.63
USP11-206ENST00000469080 PRSS35Q8N3Z0 413 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 NT5CQ8TCD5 201 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 NUDT9Q9BW91 350 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 TMEM138Q9NPI0 162 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 RASL12Q9NYN1 266 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 PRODH2Q9UF12 536 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 NPTNQ9Y639 398 aa11.13□□□□□ -0.63
USP11-206ENST00000469080 TLCD2A6NGC4 264 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 IFNA10P01566 189 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 HSD11B2P80365 405 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 ULK3Q6PHR2 472 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 LINC00346Q8IVM7 164 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 SLC39A7Q92504 469 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 PPP1R14AQ96A00 147 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 ZNF75AQ96N20 296 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 G6PC3Q9BUM1 346 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 LYRM4Q9HD34 91 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 FAM96BQ9Y3D0 163 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 BOD1L1Q8NFC6 3051 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 TMEM238LA0A1B0GVL6 79 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 B4E171 279 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 SYT5O00445 386 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 EREGO14944 169 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 SRPX2O60687 465 aaPredicted RBP11.12□□□□□ -0.63
USP11-206ENST00000469080 PIAS2O75928 621 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 CT45A8P0DMV1 189 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 CT45A9P0DMV2 189 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 DCDP81605 110 aaKnown RBP11.12□□□□□ -0.63
USP11-206ENST00000469080 TRA2AQ13595 282 aaKnown RBP eCLIP11.12□□□□□ -0.63
USP11-206ENST00000469080 KIAA0141Q14154 515 aaPredicted RBP11.12□□□□□ -0.63
USP11-206ENST00000469080 PLK5Q496M5 336 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 CT45A2Q5DJT8 189 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 ZNF385CQ66K41 422 aaPredicted RBP11.12□□□□□ -0.63
USP11-206ENST00000469080 ZNF550Q7Z398 422 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 OR2W3Q7Z3T1 314 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 OR6X1Q8NH79 312 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 NPRL2Q8WTW4 380 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 ROBO4Q8WZ75 1007 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 METTL7AQ9H8H3 244 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 ZMAT3Q9HA38 289 aaKnown RBP11.12□□□□□ -0.63
USP11-206ENST00000469080 LSM2Q9Y333 95 aaKnown RBP11.12□□□□□ -0.63
USP11-206ENST00000469080 ZNHIT1O43257 154 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 CREBL2O60519 120 aaPredicted RBP11.12□□□□□ -0.63
USP11-206ENST00000469080 IFNA2P01563 188 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 ATP1B1P05026 303 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 ZNF239Q16600 458 aaKnown RBP11.12□□□□□ -0.63
USP11-206ENST00000469080 SLC25A35Q3KQZ1 300 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 ZNF322Q6U7Q0 402 aaPredicted RBP11.12□□□□□ -0.63
USP11-206ENST00000469080 STT3BQ8TCJ2 826 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 CCDC107Q8WV48 283 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 FOXRED1Q96CU9 486 aaPredicted RBP11.12□□□□□ -0.63
USP11-206ENST00000469080 PRSS27Q9BQR3 290 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 SLC25A19Q9HC21 320 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 ZDHHC8Q9ULC8 765 aa11.12□□□□□ -0.63
USP11-206ENST00000469080 KANTRA0A1W2PQU2 76 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 SLC16A7O60669 478 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 SCRG1O75711 98 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 DIRAS3O95661 229 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 SNRNP70P08621 437 aaKnown RBP11.11□□□□□ -0.63
USP11-206ENST00000469080 GP1BBP13224 206 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 AVPR2P30518 371 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 F2RL1P55085 397 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 OR7A5Q15622 319 aa11.11□□□□□ -0.63
USP11-206ENST00000469080 DEGS2Q6QHC5 323 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms