RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PPIAL4DF5H284 164 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 PPP1R3DO95685 299 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 PPIAL4FP0DN26 164 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 RAC2P15153 192 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 TNFRSF1AP19438 455 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 SLC6A9P48067 706 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 BTG1P62324 171 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 HIST1H3AP68431 136 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 TMEM155Q4W5P6 130 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 HIST2H3PS2Q5TEC6 136 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 OR2T2Q6IF00 324 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 CORO6Q6QEF8 472 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 HIST2H3AQ71DI3 136 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 ADCK1Q86TW2 530 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 JMJD8Q96S16 334 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 RBM4Q9BWF3 364 aaKnown RBP20.59■□□□□ 0.89
PTCH1-210ENST00000468211 AURKCQ9UQB9 309 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 V9GYQ6 96 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 F5H0A9 414 aaPredicted RBP20.58■□□□□ 0.89
PTCH1-210ENST00000468211 NDUFAB1O14561 156 aa20.58■□□□□ 0.89
PTCH1-210ENST00000468211 MMP16P51512 607 aa20.58■□□□□ 0.89
PTCH1-210ENST00000468211 RSPO1Q2MKA7 263 aaPredicted RBP20.58■□□□□ 0.89
PTCH1-210ENST00000468211 FBXW12Q6X9E4 464 aa20.58■□□□□ 0.89
PTCH1-210ENST00000468211 KLHL36Q8N4N3 616 aa20.58■□□□□ 0.89
PTCH1-210ENST00000468211 SPICQ8N5J4 248 aa20.58■□□□□ 0.89
PTCH1-210ENST00000468211 OR10AD1Q8NGE0 317 aa20.58■□□□□ 0.89
PTCH1-210ENST00000468211 COG8Q96MW5 612 aa20.58■□□□□ 0.89
PTCH1-210ENST00000468211 GCM1Q9NP62 436 aa20.58■□□□□ 0.89
PTCH1-210ENST00000468211 POLR3KQ9Y2Y1 108 aaPredicted RBP20.58■□□□□ 0.89
PTCH1-210ENST00000468211 IGLV1-36A0A0B4J1U3 117 aa20.57■□□□□ 0.88
PTCH1-210ENST00000468211 H0YL77 283 aa20.57■□□□□ 0.88
PTCH1-210ENST00000468211 TMEM178BH3BS89 294 aa20.57■□□□□ 0.88
PTCH1-210ENST00000468211 CENPAP49450 140 aa20.57■□□□□ 0.88
PTCH1-210ENST00000468211 TUSC1Q2TAM9 212 aa20.57■□□□□ 0.88
PTCH1-210ENST00000468211 KLF17Q5JT82 389 aaPredicted RBP20.57■□□□□ 0.88
PTCH1-210ENST00000468211 SMARCD3Q6STE5 483 aa20.57■□□□□ 0.88
PTCH1-210ENST00000468211 ATG16L2Q8NAA4 619 aa20.57■□□□□ 0.88
PTCH1-210ENST00000468211 ZNF420Q8TAQ5 688 aaPredicted RBP20.57■□□□□ 0.88
PTCH1-210ENST00000468211 ERMAPQ96PL5 475 aaPredicted RBP20.57■□□□□ 0.88
PTCH1-210ENST00000468211 ELAC2Q9BQ52 826 aaKnown RBP20.57■□□□□ 0.88
PTCH1-210ENST00000468211 POLR1DQ9Y2S0 133 aa20.57■□□□□ 0.88
PTCH1-210ENST00000468211 PPIAL4AQ9Y536 164 aa20.57■□□□□ 0.88
PTCH1-210ENST00000468211 IGHV3-64DA0A0J9YX35 117 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 SURF4O15260 269 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 ZNF205O95201 554 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 ZNF12P17014 697 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 RPS6KA3P51812 740 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 PRSS12P56730 875 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 UBA52P62987 128 aaKnown RBP20.56■□□□□ 0.88
PTCH1-210ENST00000468211 ZNF154Q13106 437 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 HSP90B2PQ58FF3 399 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 OR6V1Q8N148 313 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 OR8G5Q8NG78 346 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 WDR76Q9H967 626 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 SRA1Q9HD15 236 aaKnown RBP20.56■□□□□ 0.88
PTCH1-210ENST00000468211 SPAG4Q9NPE6 437 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 ADA2Q9NZK5 511 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 ATPIF1Q9UII2 106 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 B9D1Q9UPM9 204 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 SAMD4AQ9UPU9 718 aaKnown RBP20.56■□□□□ 0.88
PTCH1-210ENST00000468211 INSIG2Q9Y5U4 225 aa20.56■□□□□ 0.88
PTCH1-210ENST00000468211 A8MXK9 166 aa20.55■□□□□ 0.88
PTCH1-210ENST00000468211 MLNRO43193 412 aa20.55■□□□□ 0.88
PTCH1-210ENST00000468211 SEMG1P04279 462 aa20.55■□□□□ 0.88
PTCH1-210ENST00000468211 RGS6P49758 472 aa20.55■□□□□ 0.88
PTCH1-210ENST00000468211 BCL6BQ8N143 479 aaPredicted RBP20.55■□□□□ 0.88
PTCH1-210ENST00000468211 SIGLECL1Q8N7X8 197 aa20.55■□□□□ 0.88
PTCH1-210ENST00000468211 C3orf56Q8N813 242 aa20.55■□□□□ 0.88
PTCH1-210ENST00000468211 POP5Q969H6 163 aaKnown RBP20.55■□□□□ 0.88
PTCH1-210ENST00000468211 APOBEC3DQ96AK3 386 aaPredicted RBP20.55■□□□□ 0.88
PTCH1-210ENST00000468211 CMTM5Q96DZ9 223 aa20.55■□□□□ 0.88
PTCH1-210ENST00000468211 MEGF10Q96KG7 1140 aa20.55■□□□□ 0.88
PTCH1-210ENST00000468211 NMNAT3Q96T66 252 aa20.55■□□□□ 0.88
PTCH1-210ENST00000468211 COQ7Q99807 217 aa20.55■□□□□ 0.88
PTCH1-210ENST00000468211 ZNF69Q9UC07 566 aa20.55■□□□□ 0.88
PTCH1-210ENST00000468211 CEACAM18A8MTB9 384 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 J3QW42 95 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 CYB5R3P00387 301 aaPredicted RBP20.54■□□□□ 0.88
PTCH1-210ENST00000468211 FPR2P25090 351 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 CRABP1P29762 137 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 MSX2P35548 267 aaPredicted RBP20.54■□□□□ 0.88
PTCH1-210ENST00000468211 MDH2P40926 338 aaKnown RBP20.54■□□□□ 0.88
PTCH1-210ENST00000468211 COX10Q12887 443 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 RFX4Q33E94 735 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 LEG1Q6P5S2 330 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 CFAP77Q6ZQR2 320 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 LINC00346Q8IVM7 164 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 BHLHE23Q8NDY6 225 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 GJC3Q8NFK1 279 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 SLC26A10Q8NG04 563 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 OR4K13Q8NH42 304 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 FANK1Q8TC84 345 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 C1QTNF5Q9BXJ0 243 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 HDHD2Q9H0R4 259 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 OR52D1Q9H346 318 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 GORASP2Q9H8Y8 452 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 AUP1Q9Y679 476 aa20.54■□□□□ 0.88
PTCH1-210ENST00000468211 F5H5P2 479 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 WNT2P09544 360 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 HIST1H1CP16403 213 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms