RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 SMARCD3Q6STE5 483 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 HACD2Q6Y1H2 254 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 DPY19L2P2Q6ZN68 376 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 Q6ZR03 302 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 PTCHD4Q6ZW05 846 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 ADCK1Q86TW2 530 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 LINC00346Q8IVM7 164 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 GJC3Q8NFK1 279 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 OR2AJ1Q8NGZ0 328 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 ZNF420Q8TAQ5 688 aaPredicted RBP11.67□□□□□ -0.54
RPP40-203ENST00000464646 ZFAND2BQ8WV99 257 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 HAVCR1Q96D42 359 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 ZNF582Q96NG8 517 aaPredicted RBP11.67□□□□□ -0.54
RPP40-203ENST00000464646 MRI1Q9BV20 369 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 IFT27Q9BW83 186 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 PATZ1Q9HBE1 687 aaKnown RBP11.67□□□□□ -0.54
RPP40-203ENST00000464646 NRIP3Q9NQ35 241 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 TUBG2Q9NRH3 451 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 NDUFAF4Q9P032 175 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 OR5V1Q9UGF6 321 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 IL19Q9UHD0 177 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 TMCC3Q9ULS5 477 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 AUP1Q9Y679 476 aa11.67□□□□□ -0.54
RPP40-203ENST00000464646 A0A1W2PRQ8 180 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 F5H5K5 113 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 CYB5R3P00387 301 aaPredicted RBP11.66□□□□□ -0.54
RPP40-203ENST00000464646 IRF2P14316 349 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 RAC2P15153 192 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 ZFP36P26651 326 aaKnown RBP11.66□□□□□ -0.54
RPP40-203ENST00000464646 SLC6A6P31641 620 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 OMPP47874 163 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 LIMS1P48059 325 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 SRP9P49458 86 aaKnown RBP11.66□□□□□ -0.54
RPP40-203ENST00000464646 RGS6P49758 472 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 SMIM11AP58511 58 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 SEC61A1P61619 476 aaKnown RBP11.66□□□□□ -0.54
RPP40-203ENST00000464646 DGCR6Q14129 220 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 SEC23BQ15437 767 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 SLC27A4Q6P1M0 643 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 CPLX4Q7Z7G2 160 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 OR4K13Q8NH42 304 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 APOBEC3DQ96AK3 386 aaPredicted RBP11.66□□□□□ -0.54
RPP40-203ENST00000464646 DUX5Q96PT3 197 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 NMNAT3Q96T66 252 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 PITX2Q99697 317 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 HCAR1Q9BXC0 346 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 MED4Q9NPJ6 270 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 RPRD1BQ9NQG5 326 aaKnown RBP11.66□□□□□ -0.54
RPP40-203ENST00000464646 MMP26Q9NRE1 261 aa11.66□□□□□ -0.54
RPP40-203ENST00000464646 DCAF13Q9NV06 445 aaKnown RBP11.66□□□□□ -0.54
RPP40-203ENST00000464646 VSX1Q9NZR4 365 aaPredicted RBP11.66□□□□□ -0.54
RPP40-203ENST00000464646 IGHV3OR16-10A0A075B7F0 116 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 ICMTO60725 284 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 RPS2P15880 293 aaKnown RBP11.65□□□□□ -0.54
RPP40-203ENST00000464646 MSX2P35548 267 aaPredicted RBP11.65□□□□□ -0.54
RPP40-203ENST00000464646 MDH2P40926 338 aaKnown RBP11.65□□□□□ -0.54
RPP40-203ENST00000464646 PRSS12P56730 875 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 ZMYND11Q15326 602 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 SLC36A3Q495N2 470 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 PGM2L1Q6PCE3 622 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 USP43Q70EL4 1123 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 TSEN54Q7Z6J9 526 aaKnown RBP11.65□□□□□ -0.54
RPP40-203ENST00000464646 MUC20Q8N307 709 aaPredicted RBP11.65□□□□□ -0.54
RPP40-203ENST00000464646 ZNF283Q8N7M2 679 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 FAM86B1Q8N7N1 296 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 SIGLECL1Q8N7X8 197 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 OR8G5Q8NG78 346 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 OR13G1Q8NGZ3 307 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 FAM216AQ8WUB2 273 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 PYURFQ96I23 114 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 NSMCE2Q96MF7 247 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 PLA2G12AQ9BZM1 189 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 MS4A7Q9GZW8 240 aaPredicted RBP11.65□□□□□ -0.54
RPP40-203ENST00000464646 HDHD2Q9H0R4 259 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 OR52D1Q9H346 318 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 FN3KQ9H479 309 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 NTN4Q9HB63 628 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 ABCD2Q9UBJ2 740 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 N6AMT1Q9Y5N5 214 aa11.65□□□□□ -0.54
RPP40-203ENST00000464646 LRRC30A6NM36 301 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 F5H5P2 479 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 H0YL77 283 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 TMEM178BH3BS89 294 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 LCATP04180 440 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 FABP3P05413 133 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 HIST1H1CP16403 213 aaKnown RBP11.64□□□□□ -0.55
RPP40-203ENST00000464646 ZNF823P16415 610 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 FPR3P25089 353 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 RRM2P31350 389 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 IFNGR2P38484 337 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 SLC6A9P48067 706 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 RAD23AP54725 363 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 GNB2P62879 340 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 DBPQ10586 325 aaPredicted RBP11.64□□□□□ -0.55
RPP40-203ENST00000464646 MALLQ13021 153 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 ZNF154Q13106 437 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 RFX4Q33E94 735 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 TMEM155Q4W5P6 130 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 SLC35F1Q5T1Q4 408 aa11.64□□□□□ -0.55
RPP40-203ENST00000464646 C8orf82Q6P1X6 216 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms