RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ELF5Q9UKW6 265 aaPredicted RBP13.4□□□□□ -0.26
LDLR-202ENST00000455727 A0A1W2PNR3 127 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 AQP7P3A6NL99 342 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 G3V3Q6 166 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 PYCARD-AS1I3L0S3 204 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 SNAPC5O75971 98 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 UMODP07911 640 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 GTF2F2P13984 249 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 HSD11B1P28845 292 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 MC2RQ01718 297 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 IKZF1Q13422 519 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 LGALSLQ3ZCW2 172 aaPredicted RBP13.4□□□□□ -0.26
LDLR-202ENST00000455727 CDH26Q8IXH8 852 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 JAGN1Q8N5M9 183 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 M1APQ8TC57 530 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 SEH1LQ96EE3 360 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 PBOV1Q9GZY1 135 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 LHFPL6Q9Y693 200 aa13.4□□□□□ -0.26
LDLR-202ENST00000455727 EIF1AYO14602 144 aaKnown RBP13.39□□□□□ -0.27
LDLR-202ENST00000455727 OR2A4O95047 310 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 GIPP09681 153 aaPredicted RBP13.39□□□□□ -0.27
LDLR-202ENST00000455727 ZNF43P17038 809 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 BDKRB2P30411 391 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 SLC35A1P78382 337 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 FOXK1P85037 733 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 RIPPLY1Q0D2K3 151 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 TEX261Q6UWH6 196 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 GTPBP8Q8N3Z3 284 aaPredicted RBP13.39□□□□□ -0.27
LDLR-202ENST00000455727 TMEM229BQ8NBD8 167 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 OR5M1Q8NGP8 315 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 FGGYQ96C11 551 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 NTNG2Q96CW9 530 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 OR2A7Q96R45 310 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 GINS4Q9BRT9 223 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 TMEM185BQ9H7F4 350 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 HEXA-AS1Q9H8Q6 139 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 ZNF69Q9UC07 566 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 GDF2Q9UK05 429 aaPredicted RBP13.39□□□□□ -0.27
LDLR-202ENST00000455727 COLQQ9Y215 455 aaPredicted RBP13.39□□□□□ -0.27
LDLR-202ENST00000455727 U3KQ87 197 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 A0A1W2PPL8 197 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 ZNF878C9JN71 531 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 ERVH48-1M5A8F1 160 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 GDF9O60383 454 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 LMX1BO60663 402 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 KLF7O75840 302 aaPredicted RBP13.39□□□□□ -0.27
LDLR-202ENST00000455727 CER1O95813 267 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 COX6A1P12074 109 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 TAS2R19P59542 299 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 CSRP2Q16527 193 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 TMEM176BQ3YBM2 270 aaPredicted RBP13.39□□□□□ -0.27
LDLR-202ENST00000455727 STEAP1BQ6NZ63 245 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 ZNF529Q6P280 563 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 GPAT4Q86UL3 456 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 OR2AJ1Q8NGZ0 328 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 MR1Q95460 341 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 ZC3H10Q96K80 434 aaKnown RBP13.39□□□□□ -0.27
LDLR-202ENST00000455727 UQCC2Q9BRT2 126 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 ANGPTL4Q9BY76 406 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 TMEM138Q9NPI0 162 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 RYDENQ9NUL5 291 aaKnown RBP13.39□□□□□ -0.27
LDLR-202ENST00000455727 B3GNT2Q9NY97 397 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 MGAT4CQ9UBM8 478 aa13.39□□□□□ -0.27
LDLR-202ENST00000455727 LOC101059948A0A1B0GTJ6 334 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 ZNF814B7Z6K7 855 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 C9J4A7 227 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 SYT7O43581 403 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 PMS2P2O95744 297 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 PSMA6P60900 246 aaKnown RBP13.38□□□□□ -0.27
LDLR-202ENST00000455727 RAP2BP61225 183 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 RAB12Q6IQ22 244 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 CFAP77Q6ZQR2 320 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 TMPPEQ6ZT21 453 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 OR8H1Q8NGG4 311 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 OR4D10Q8NGI6 311 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 OR5D14Q8NGL3 314 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 OR2I1PQ8NGU4 316 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 ALX4Q9H161 411 aaPredicted RBP13.38□□□□□ -0.27
LDLR-202ENST00000455727 PIPOXQ9P0Z9 390 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 RAB22AQ9UL26 194 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 PTRH2Q9Y3E5 179 aaKnown RBP13.38□□□□□ -0.27
LDLR-202ENST00000455727 WDR87Q6ZQQ6 2873 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 SULT2B1O00204 365 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 LAMTOR5O43504 91 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 OPN1LWP04000 364 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 CD3DP04234 171 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 VSIG10L2P0DP72 767 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 H3F3AP84243 136 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 DHODHQ02127 395 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 PRAMEF20Q5VT98 475 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 ZNF627Q7L945 461 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 GABRG1Q8N1C3 465 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 OR1M1Q8NGA1 313 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 OR4D6Q8NGJ1 314 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 OR51S1Q8NGJ8 323 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 NKX3-1Q99801 234 aaPredicted RBP13.38□□□□□ -0.27
LDLR-202ENST00000455727 SEC61A2Q9H9S3 476 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 EIF3KQ9UBQ5 218 aaKnown RBP13.38□□□□□ -0.27
LDLR-202ENST00000455727 HS3ST3B1Q9Y662 390 aa13.38□□□□□ -0.27
LDLR-202ENST00000455727 UBE2QL1A1L167 161 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms