RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 DOCK11Q5JSL3 2073 aa23.78■■□□□ 1.4
CBX4-202ENST00000448310 A0A1W2PRQ8 180 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 F5H0A9 414 aaPredicted RBP23.77■■□□□ 1.4
CBX4-202ENST00000448310 RAC2P15153 192 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 ZNF12P17014 697 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 CDKN2AP42771 156 aaKnown RBP23.77■■□□□ 1.4
CBX4-202ENST00000448310 CENPAP49450 140 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 MMP16P51512 607 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 DBPQ10586 325 aaPredicted RBP23.77■■□□□ 1.4
CBX4-202ENST00000448310 DGCR6Q14129 220 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 MEP1BQ16820 701 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 KLF17Q5JT82 389 aaPredicted RBP23.77■■□□□ 1.4
CBX4-202ENST00000448310 OR2T2Q6IF00 324 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 ZNF420Q8TAQ5 688 aaPredicted RBP23.77■■□□□ 1.4
CBX4-202ENST00000448310 DUX5Q96PT3 197 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 C1QTNF5Q9BXJ0 243 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 NTN4Q9HB63 628 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 GCM1Q9NP62 436 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 RPS6KA6Q9UK32 745 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 POLR3KQ9Y2Y1 108 aaPredicted RBP23.77■■□□□ 1.4
CBX4-202ENST00000448310 FAM32AQ9Y421 112 aaKnown RBP23.77■■□□□ 1.4
CBX4-202ENST00000448310 INSIG2Q9Y5U4 225 aa23.77■■□□□ 1.4
CBX4-202ENST00000448310 TMEM178BH3BS89 294 aa23.76■■□□□ 1.39
CBX4-202ENST00000448310 ZNF205O95201 554 aa23.76■■□□□ 1.39
CBX4-202ENST00000448310 ADCK1Q86TW2 530 aa23.76■■□□□ 1.39
CBX4-202ENST00000448310 BCL6BQ8N143 479 aaPredicted RBP23.76■■□□□ 1.39
CBX4-202ENST00000448310 FAM86B1Q8N7N1 296 aa23.76■■□□□ 1.39
CBX4-202ENST00000448310 GPA33Q99795 319 aa23.76■■□□□ 1.39
CBX4-202ENST00000448310 NUP50Q9UKX7 468 aa23.76■■□□□ 1.39
CBX4-202ENST00000448310 AURKCQ9UQB9 309 aa23.76■■□□□ 1.39
CBX4-202ENST00000448310 IGHV3-64DA0A0J9YX35 117 aa23.75■■□□□ 1.39
CBX4-202ENST00000448310 UNC119BA6NIH7 251 aa23.75■■□□□ 1.39
CBX4-202ENST00000448310 A8MXK9 166 aa23.75■■□□□ 1.39
CBX4-202ENST00000448310 H0YL77 283 aa23.75■■□□□ 1.39
CBX4-202ENST00000448310 DCTN6O00399 190 aa23.75■■□□□ 1.39
CBX4-202ENST00000448310 CCDC22O60826 627 aa23.75■■□□□ 1.39
CBX4-202ENST00000448310 MDH2P40926 338 aaKnown RBP23.75■■□□□ 1.39
CBX4-202ENST00000448310 CORO6Q6QEF8 472 aa23.75■■□□□ 1.39
CBX4-202ENST00000448310 RBMS3Q6XE24 437 aaKnown RBP23.75■■□□□ 1.39
CBX4-202ENST00000448310 HACD2Q6Y1H2 254 aa23.75■■□□□ 1.39
CBX4-202ENST00000448310 OR52J3Q8NH60 311 aa23.75■■□□□ 1.39
CBX4-202ENST00000448310 ABCD2Q9UBJ2 740 aa23.75■■□□□ 1.39
CBX4-202ENST00000448310 LHFPL6Q9Y693 200 aa23.75■■□□□ 1.39
CBX4-202ENST00000448310 MGAM2Q2M2H8 2515 aa23.75■■□□□ 1.39
CBX4-202ENST00000448310 CEACAM18A8MTB9 384 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 PPP1R3DO95685 299 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 CYB5R3P00387 301 aaPredicted RBP23.74■■□□□ 1.39
CBX4-202ENST00000448310 RHCEP18577 417 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 RGS6P49758 472 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 PSME3P61289 254 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 KCNMB1Q16558 191 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 ESCO2Q56NI9 601 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 FBXW12Q6X9E4 464 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 DPY19L2P2Q6ZN68 376 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 OR8G5Q8NG78 346 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 MEGF10Q96KG7 1140 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 C7orf34Q96L11 122 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 MRI1Q9BV20 369 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 WDR76Q9H967 626 aa23.74■■□□□ 1.39
CBX4-202ENST00000448310 TXNDC12O95881 172 aa23.73■■□□□ 1.39
CBX4-202ENST00000448310 RPS6KA3P51812 740 aa23.73■■□□□ 1.39
CBX4-202ENST00000448310 PRSS12P56730 875 aa23.73■■□□□ 1.39
CBX4-202ENST00000448310 TUSC1Q2TAM9 212 aa23.73■■□□□ 1.39
CBX4-202ENST00000448310 GLYATQ6IB77 296 aa23.73■■□□□ 1.39
CBX4-202ENST00000448310 DOK3Q7L591 496 aa23.73■■□□□ 1.39
CBX4-202ENST00000448310 BHLHE23Q8NDY6 225 aa23.73■■□□□ 1.39
CBX4-202ENST00000448310 OR5L1Q8NGL2 311 aa23.73■■□□□ 1.39
CBX4-202ENST00000448310 SGMS2Q8NHU3 365 aa23.73■■□□□ 1.39
CBX4-202ENST00000448310 APOBEC3DQ96AK3 386 aaPredicted RBP23.73■■□□□ 1.39
CBX4-202ENST00000448310 OR5V1Q9UGF6 321 aa23.73■■□□□ 1.39
CBX4-202ENST00000448310 ATPIF1Q9UII2 106 aa23.73■■□□□ 1.39
CBX4-202ENST00000448310 V9GYQ6 96 aa23.73■■□□□ 1.39
CBX4-202ENST00000448310 DNAJC9-AS1A6NH13 148 aa23.72■■□□□ 1.39
CBX4-202ENST00000448310 J3QW42 95 aa23.72■■□□□ 1.39
CBX4-202ENST00000448310 NDUFAB1O14561 156 aa23.72■■□□□ 1.39
CBX4-202ENST00000448310 MLNRO43193 412 aa23.72■■□□□ 1.39
CBX4-202ENST00000448310 HIST1H3AP68431 136 aa23.72■■□□□ 1.39
CBX4-202ENST00000448310 HIST2H3PS2Q5TEC6 136 aa23.72■■□□□ 1.39
CBX4-202ENST00000448310 SMARCD3Q6STE5 483 aa23.72■■□□□ 1.39
CBX4-202ENST00000448310 HIST2H3AQ71DI3 136 aa23.72■■□□□ 1.39
CBX4-202ENST00000448310 MUC20Q8N307 709 aaPredicted RBP23.72■■□□□ 1.39
CBX4-202ENST00000448310 GJC3Q8NFK1 279 aa23.72■■□□□ 1.39
CBX4-202ENST00000448310 OR13G1Q8NGZ3 307 aa23.72■■□□□ 1.39
CBX4-202ENST00000448310 ZNF48Q96MX3 618 aaPredicted RBP23.72■■□□□ 1.39
CBX4-202ENST00000448310 ZNF582Q96NG8 517 aaPredicted RBP23.72■■□□□ 1.39
CBX4-202ENST00000448310 ERMAPQ96PL5 475 aaPredicted RBP23.72■■□□□ 1.39
CBX4-202ENST00000448310 COQ7Q99807 217 aa23.72■■□□□ 1.39
CBX4-202ENST00000448310 HDHD2Q9H0R4 259 aa23.72■■□□□ 1.39
CBX4-202ENST00000448310 SRA1Q9HD15 236 aaKnown RBP23.72■■□□□ 1.39
CBX4-202ENST00000448310 PCDHGB1Q9Y5G3 927 aa23.72■■□□□ 1.39
CBX4-202ENST00000448310 IGLV1-36A0A0B4J1U3 117 aa23.71■■□□□ 1.39
CBX4-202ENST00000448310 WNT2P09544 360 aa23.71■■□□□ 1.39
CBX4-202ENST00000448310 SLC27A4Q6P1M0 643 aa23.71■■□□□ 1.39
CBX4-202ENST00000448310 DNM1P34Q6PK57 102 aa23.71■■□□□ 1.39
CBX4-202ENST00000448310 MOGAT3Q86VF5 341 aa23.71■■□□□ 1.39
CBX4-202ENST00000448310 RNF148Q8N7C7 305 aa23.71■■□□□ 1.39
CBX4-202ENST00000448310 C1orf147Q96MC9 270 aaPredicted RBP23.71■■□□□ 1.39
CBX4-202ENST00000448310 FUZQ9BT04 418 aa23.71■■□□□ 1.39
CBX4-202ENST00000448310 TMEM165Q9HC07 324 aa23.71■■□□□ 1.39
CBX4-202ENST00000448310 KRCC1Q9NPI7 259 aaPredicted RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms