RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PLK3Q9H4B4 646 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 CBLN4Q9NTU7 201 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 CLN6Q9NWW5 311 aa12.55□□□□□ -0.4
SGCE-204ENST00000428696 PSMD9O00233 223 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 RRP9O43818 475 aaKnown RBP12.54□□□□□ -0.4
SGCE-204ENST00000428696 ENTPD6O75354 484 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 CLIC3O95833 236 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 LCATP04180 440 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 H2BFMP0C1H6 154 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 DANCRP0C864 163 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 GCH1P30793 250 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 GLRXP35754 106 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 TPTEP56180 551 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 PPP1CBP62140 327 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 SNRPD2P62316 118 aaKnown RBP12.54□□□□□ -0.4
SGCE-204ENST00000428696 HIST1H3AP68431 136 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 NKX6-1P78426 367 aaPredicted RBP12.54□□□□□ -0.4
SGCE-204ENST00000428696 IL5RAQ01344 420 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 DEFB113Q30KQ7 82 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 TEX30Q5JUR7 227 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 HIST2H3PS2Q5TEC6 136 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 HIST2H3AQ71DI3 136 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 SLC16A9Q7RTY1 509 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 NAA40Q86UY6 237 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 LRP11Q86VZ4 500 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 OR51G2Q8NGK0 314 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 SYNPRQ8TBG9 265 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 RFKQ969G6 155 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 TBX5Q99593 518 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 COQ7Q99807 217 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 ABHD6Q9BV23 337 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 CACNG6Q9BXT2 260 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 BCL2L14Q9BZR8 327 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 DYNLRB1Q9NP97 96 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 BRD7Q9NPI1 651 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 STARD10Q9Y365 291 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 RRP15Q9Y3B9 282 aaKnown RBP12.54□□□□□ -0.4
SGCE-204ENST00000428696 PMF1-BGLAPU3KQ54 211 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 CASQ2O14958 399 aaPredicted RBP12.54□□□□□ -0.4
SGCE-204ENST00000428696 ATP6V1G2O95670 118 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 CD8AP01732 235 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 LYNP07948 512 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 PCSK6P29122 969 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 SLC15A1P46059 708 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 ZNF718Q3SXZ3 478 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 RFPL4BQ6ZWI9 263 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 KRT77Q7Z794 578 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 ZNF283Q8N7M2 679 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 ZNF454Q8N9F8 522 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 SLC25A40Q8TBP6 338 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 RDH12Q96NR8 316 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 TRAF4Q9BUZ4 470 aaPredicted RBP12.54□□□□□ -0.4
SGCE-204ENST00000428696 MRPL37Q9BZE1 423 aaKnown RBP12.54□□□□□ -0.4
SGCE-204ENST00000428696 OR2J1Q9GZK6 312 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 ZNF442Q9H7R0 627 aa12.54□□□□□ -0.4
SGCE-204ENST00000428696 WARS2Q9UGM6 360 aaKnown RBP12.54□□□□□ -0.4
SGCE-204ENST00000428696 NAV2Q8IVL1 2488 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 CSMD2Q7Z408 3487 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 B9A039 149 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 ZNF878C9JN71 531 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 DLGAP1O14490 977 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 CLPTM1O96005 669 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 SLC2A1P11166 492 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 HTR1FP30939 366 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 ART1P52961 327 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 NUDT6P53370 316 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 MAD2L1BPQ15013 274 aaPredicted RBP12.53□□□□□ -0.4
SGCE-204ENST00000428696 NKPD1Q17RQ9 610 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 TTC23Q5W5X9 447 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 SLC35F2Q8IXU6 374 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 OR10H4Q8NGA5 316 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 OR5L1Q8NGL2 311 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 OR10S1Q8NGN2 331 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 OTOSQ8NHW6 89 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 NRG4Q8WWG1 115 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 NINJ1Q92982 152 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 MRPL24Q96A35 216 aaKnown RBP12.53□□□□□ -0.4
SGCE-204ENST00000428696 TRMT61AQ96FX7 289 aaKnown RBP12.53□□□□□ -0.4
SGCE-204ENST00000428696 Q96MT0 163 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 AMELYQ99218 206 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 YIPF3Q9GZM5 350 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 MARCH7Q9H992 704 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 AMBNQ9NP70 447 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 PNRC2Q9NPJ4 139 aaKnown RBP12.53□□□□□ -0.4
SGCE-204ENST00000428696 PTTG3PQ9NZH4 202 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 TAAR3PQ9P1P4 343 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 IKZF2Q9UKS7 526 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 KLHDC2Q9Y2U9 406 aa12.53□□□□□ -0.4
SGCE-204ENST00000428696 ANKRD17O75179 2603 aaKnown RBP12.52□□□□□ -0.41
SGCE-204ENST00000428696 SNTNA6NMZ2 147 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 ZNF670-ZNF695F2Z2N8 137 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 M0R135 149 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 SLC16A6O15403 523 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 MPZL2O60487 215 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 ANXA2P07355 339 aaKnown RBP12.52□□□□□ -0.41
SGCE-204ENST00000428696 ADRA2AP08913 450 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 ACSM4P0C7M7 580 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 ALDH3B1P43353 468 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 ATP5J2P56134 94 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 KLF3P57682 345 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms