RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 HMGCLP35914 325 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 ETV6P41212 452 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 SELENOPP49908 381 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 ETV1P50549 477 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 P2RX1P51575 399 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 RPL19P84098 196 aaKnown RBP3.15□□□□□ -1.9
TOP2A-201ENST00000423485 GAMTQ14353 236 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 Q56UQ5 140 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 FRG2Q64ET8 278 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 SIGIRRQ6IA17 410 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 TMEM17Q86X19 198 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 CBR4Q8N4T8 237 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 DHRSXQ8N5I4 330 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 OR52B4Q8NGK2 314 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 CCL4L1Q8NHW4 92 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 ASB10Q8WXI3 467 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 LHX4Q969G2 390 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 SLC7A6OSQ96CW6 309 aaPredicted RBP3.15□□□□□ -1.9
TOP2A-201ENST00000423485 FRG2BQ96QU4 278 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 LIN28AQ9H9Z2 209 aaKnown RBP3.15□□□□□ -1.9
TOP2A-201ENST00000423485 A4GALTQ9NPC4 353 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 TUBG2Q9NRH3 451 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 DCTN4Q9UJW0 460 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 JMJD1CQ15652 2540 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 A0A096LPE4 126 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 A0A1W2PPZ6 126 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 C5orf49A4QMS7 147 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF878C9JN71 531 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 SH2D1BO14796 132 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 DEAF1O75398 565 aaPredicted RBP3.15□□□□□ -1.91
TOP2A-201ENST00000423485 ANXA8P13928 327 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 FMO3P31513 532 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 OR3A3P47888 321 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 OR3A2P47893 321 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 TRAF2Q12933 501 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 ACSBG2Q5FVE4 666 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 COQ5Q5HYK3 327 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 SLC30A7Q8NEW0 376 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 OR10Z1Q8NGY1 313 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 OR6S1Q8NH40 331 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 HUS1BQ8NHY5 278 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 FBXO25Q8TCJ0 367 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 PPP1R36Q96LQ0 422 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 TSNAXQ99598 290 aaKnown RBP3.15□□□□□ -1.91
TOP2A-201ENST00000423485 KIFC1Q9BW19 673 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 BTBD2Q9BX70 525 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 SLC5A7Q9GZV3 580 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 SCN3BQ9NY72 215 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 GLTPQ9NZD2 209 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF391Q9UJN7 358 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 DNAH9Q9NYC9 4486 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 MED12LQ86YW9 2145 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 A0A1B0GW55 424 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 LRP5LA4QPB2 252 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 PSMB11A5LHX3 300 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 HSPB6O14558 160 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 EDF1O60869 148 aaKnown RBP3.15□□□□□ -1.91
TOP2A-201ENST00000423485 TRMUO75648 421 aaKnown RBP3.15□□□□□ -1.91
TOP2A-201ENST00000423485 HPRP00739 348 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 DUX4L2P0CJ85 424 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 DUX4L3P0CJ86 424 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 DUX4L4P0CJ87 422 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 DUX4L5P0CJ88 424 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 DUX4L6P0CJ89 424 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 DUX4L7P0CJ90 424 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 HSD3B1P14060 373 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 HOXB3P14651 431 aaPredicted RBP3.15□□□□□ -1.91
TOP2A-201ENST00000423485 ZFP36P26651 326 aaKnown RBP3.15□□□□□ -1.91
TOP2A-201ENST00000423485 ACVR1BP36896 505 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 EMDP50402 254 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 HMGCS1Q01581 520 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 LRRC75BQ2VPJ9 315 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 CTU2Q2VPK5 515 aaKnown RBP3.15□□□□□ -1.91
TOP2A-201ENST00000423485 OR4A47Q6IF82 309 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 C16orf87Q6PH81 154 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 FAM71AQ8IYT1 594 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 WDTC1Q8N5D0 677 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 TMEM251Q8N6I4 163 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 ST8SIA1Q92185 356 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 LRRC1Q9BTT6 524 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 HMG20AQ9NP66 347 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 SLC6A13Q9NSD5 602 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 DUX4Q9UBX2 424 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 NEU3Q9UQ49 428 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 IGHV1-45A0A0A0MS14 117 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.15□□□□□ -1.91
TOP2A-201ENST00000423485 SYT5O00445 386 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 TYROBPO43914 113 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 TPST2O60704 377 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 ADAM11O75078 769 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 CRLF1O75462 422 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 SOX14O95416 240 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 BCKDHAP12694 445 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 TMEM11P17152 192 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 ZP3P21754 424 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 PRKACBP22694 351 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 MPGP29372 298 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 PNLIPRP2P54317 469 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 CDH12P55289 794 aa3.15□□□□□ -1.91
TOP2A-201ENST00000423485 TNFRSF17Q02223 184 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms